Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc11g065210.1.1 | Tomato | cytosol | 95.51 | 95.51 |
GSMUA_Achr1P11380_001 | Banana | cytosol | 48.13 | 68.9 |
GSMUA_Achr8P09770_001 | Banana | cytosol | 46.44 | 57.94 |
Os07t0661300-01 | Rice | cytosol, plasma membrane | 44.57 | 48.67 |
Zm00001d022414_P001 | Maize | cytosol | 50.19 | 48.55 |
PGSC0003DMT400033182 | Potato | cytosol | 12.73 | 48.23 |
PGSC0003DMT400033175 | Potato | mitochondrion | 14.42 | 46.11 |
PGSC0003DMT400033184 | Potato | cytosol | 15.73 | 45.9 |
PGSC0003DMT400033173 | Potato | mitochondrion | 23.78 | 35.77 |
TraesCS2A01G127200.3 | Wheat | cytosol | 48.88 | 34.89 |
HORVU2Hr1G022340.2 | Barley | cytosol | 48.88 | 34.39 |
TraesCS2D01G129600.2 | Wheat | cytosol | 48.31 | 33.46 |
TraesCS2B01G149000.2 | Wheat | cytosol | 48.13 | 33.33 |
PGSC0003DMT400032703 | Potato | nucleus | 17.6 | 25.68 |
Zm00001d007096_P007 | Maize | mitochondrion | 49.25 | 22.23 |
PGSC0003DMT400093121 | Potato | cytosol | 10.3 | 19.03 |
PGSC0003DMT400093591 | Potato | cytosol | 8.8 | 18.73 |
PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 11.61 | 17.82 |
PGSC0003DMT400038315 | Potato | nucleus | 14.79 | 17.63 |
PGSC0003DMT400089939 | Potato | cytosol | 11.05 | 15.78 |
PGSC0003DMT400086994 | Potato | cytosol | 3.75 | 15.04 |
PGSC0003DMT400046008 | Potato | cytosol | 14.23 | 14.31 |
PGSC0003DMT400071055 | Potato | mitochondrion | 16.48 | 14.24 |
PGSC0003DMT400096420 | Potato | mitochondrion | 3.75 | 13.42 |
PGSC0003DMT400045160 | Potato | nucleus | 16.67 | 12.5 |
PGSC0003DMT400088084 | Potato | cytosol | 7.3 | 11.61 |
PGSC0003DMT400028924 | Potato | nucleus | 18.73 | 10.8 |
PGSC0003DMT400063184 | Potato | plastid | 0.19 | 0.45 |
Protein Annotations
EntrezGene:102580352 | MapMan:19.2.3.1.1.10 | Gene3D:3.90.70.10 | MEROPS:C19.A14 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:M1B0G0 |
PFAM:PF00443 | EnsemblPlantsGene:PGSC0003DMG400013186 | PGSC:PGSC0003DMG400013186 | EnsemblPlants:PGSC0003DMT400034298 | ScanProsite:PS00972 | ScanProsite:PS00973 |
PFscan:PS50235 | PANTHER:PTHR44747 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0002954DCA |
InterPro:USP_CS | InterPro:USP_dom | RefSeq:XP_006362319.1 | SEG:seg | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400013186]
Coordinates
chr11:+:36652524..36661214
Molecular Weight (calculated)
58952.8 Da
IEP (calculated)
6.597
GRAVY (calculated)
-0.306
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDQKVLIFG SFTEDEIKTL QSQPTTDVGI TFGSLDSATL KSVGIFDTKL TEFDHSKKLQ PSELVHRANV TEAHSNTGKT KKSIGNTVKE YGSSSFTNPA
101: YNGSVLHPTV NTGSAYDSSE KSSLLQSAAD NVSELSSSVH DVHLTNQLKN YNLVNGRHTS LNASSNGSAV VFRSFLPRGL VNLGNLCFLN ATLQALLSCS
201: PFVHLLQELK TRDITEAGYP TLHAFVQFIS DFGIYIDPSM KKKETIVPEI GLPFRPLMFE SVLKNFTPDV ANSLTGRPRQ EDVQEFLSFL MHQMHDELLK
301: LEGQVPNGIG RNSSLVSSPD DEEEDDDWET VGPRNKTAVT RTQSFVPSKL SEIFGGQLKS VVKAKGNKAS ATVQPFLLLH LNIYPEPICS IEDALRMFSA
401: PEALEGYRTS AAGKAEVVSA SKSVKILELS DIMVLHLMRF SYESEGSTKL HKPVHFPLEL VFGRELLDSP TEGRKYELVA TITHHGRDPS KGHYTADARH
501: PSGKWLRYDD VSVTAIPTSK VLHDQAYVLF YKQL
101: YNGSVLHPTV NTGSAYDSSE KSSLLQSAAD NVSELSSSVH DVHLTNQLKN YNLVNGRHTS LNASSNGSAV VFRSFLPRGL VNLGNLCFLN ATLQALLSCS
201: PFVHLLQELK TRDITEAGYP TLHAFVQFIS DFGIYIDPSM KKKETIVPEI GLPFRPLMFE SVLKNFTPDV ANSLTGRPRQ EDVQEFLSFL MHQMHDELLK
301: LEGQVPNGIG RNSSLVSSPD DEEEDDDWET VGPRNKTAVT RTQSFVPSKL SEIFGGQLKS VVKAKGNKAS ATVQPFLLLH LNIYPEPICS IEDALRMFSA
401: PEALEGYRTS AAGKAEVVSA SKSVKILELS DIMVLHLMRF SYESEGSTKL HKPVHFPLEL VFGRELLDSP TEGRKYELVA TITHHGRDPS KGHYTADARH
501: PSGKWLRYDD VSVTAIPTSK VLHDQAYVLF YKQL
001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
Arabidopsis Description
UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.