Factsheet for Os07t0661300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P11380_001	Banana	cytosol	49.69	65.15
Zm00001d022414_P001	Maize	cytosol	68.51	60.69
CDX72275	Canola	cytosol	44.99	59.46
GSMUA_Achr8P09770_001	Banana	cytosol	49.69	56.78
Bra024037.1-P	Field mustard	cytosol	44.79	54.75
TraesCS2A01G127200.3	Wheat	cytosol	71.78	46.93
OQU90420	Sorghum	mitochondrion	70.14	46.54
PGSC0003DMT400033175	Potato	mitochondrion	15.75	46.11
PGSC0003DMT400033182	Potato	cytosol	13.29	46.1
KRH39864	Soybean	cytosol	49.28	45.3
TraesCS2B01G149000.2	Wheat	cytosol	71.37	45.27
KRH23933	Soybean	cytosol	49.9	45.1
TraesCS2D01G129600.2	Wheat	cytosol	70.96	45.01
HORVU2Hr1G022340.2	Barley	cytosol	69.73	44.93
PGSC0003DMT400033184	Potato	cytosol	16.77	44.81
Solyc11g065210.1.1	Tomato	cytosol	48.88	44.76
PGSC0003DMT400034298	Potato	cytosol	48.67	44.57
VIT_13s0019g01690.t01	Wine grape	cytosol	50.31	44.48
Solyc01g068240.2.1	Tomato	cytosol	48.47	44.47
CDY23262	Canola	nucleus	47.44	42.41
AT4G30890.2	Thale cress	cytosol	47.44	42.11
Bra010268.1-P	Field mustard	cytosol	47.24	40.6
CDY36465	Canola	cytosol	47.44	39.52
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	47.44	39.32
CDY28224	Canola	endoplasmic reticulum, vacuole	47.44	39.32
CDX68701	Canola	endoplasmic reticulum, extracellular	46.63	38.19
PGSC0003DMT400033173	Potato	mitochondrion	24.34	33.52
Zm00001d007096_P007	Maize	mitochondrion	68.1	28.15
Os03t0190800-01	Rice	cytosol	19.43	25.96
Os04t0452400-01	Rice	nucleus	18.81	25.07
Os02t0573400-01	Rice	nucleus	18.0	21.2
Os04t0647300-01	Rice	nucleus	18.4	15.23
Os05t0510300-01	Rice	plastid	18.4	13.98
Os06t0184300-01	Rice	mitochondrion	20.65	10.93
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	20.65	10.36
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	18.4	9.7
Os06t0654000-01	Rice	cytosol, nucleus	18.61	9.64
Os08t0478500-01	Rice	plastid	19.22	9.61
Os02t0795000-01	Rice	nucleus	20.25	8.35

Protein Annotations

MapMan:19.2.3.1.1.10	Gene3D:3.90.70.10	ProteinID:BAF22450.1	ProteinID:BAT03055.1	MEROPS:C19.A14	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	InterPro:IPR028889	EnsemblPlantsGene:Os07g0661300	EnsemblPlants:Os07t0661300-01	PFAM:PF00443	ScanProsite:PS00972
ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR44747	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	UniProt:Q0D3X3
SUPFAM:SSF54001	UniParc:UPI0000E12C53	InterPro:USP_CS	InterPro:USP_dom	:	:

Description

Similar to Ubiquitin-specific protease 24. (Os07t0661300-01)

Coordinates

chr7:+:27884566..27888239

Molecular Weight (calculated)

53332.5 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.280

Length

489 amino acids

Sequence
(BLAST)

001: LSDGQNKIII TKDIACSNKK ETVAPTLPNG KPVLFNGSPT ANANVSPNNG VIENNQKAVA AVLTSVPAKN VSSPAPLSVP EVDHDGIERN QNSSLVPEIT
101: ENGGPAIDTP TTAAPVDELV TSLNKKDFRN KPLLPHGLKN TGNICFLNSS LQALLSCWPF VQLLQNLRNQ NIPKAGYPTL NAFIEFISQF DVLDDSNVKK
201: DEKFATIASK SVIPSMFDTV LRNFTPDVPA GTASRPRQED AQEFLSFAMD RMHDELVKLN GNGSNSKEGM IVSSNDDDAW ETVGKKNKSA IMRSQSFVPS
301: ELTAIFGGQL QSCVKATGNK ASVTVQPFRL IHLDIFPDAV QKLDDALRLF AAPESLEGYR TAAGKAGLVT ARKSVKIHSL SKIMILHLKR FSYGSHGCTK
401: LFKPIHFPLE LVLSRDLLSS PSSEHMQSRR YELVATITHL GANPSRGHYT ADAKSASGQW LRFDDDNVTP VSLNKVLHDQ AYVLFYKQL

Best Arabidopsis Sequence Match ( AT4G30890.3 )
(BLAST)

001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V

Arabidopsis Description

UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.