Factsheet for Os05t0510300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G14400.1	Os01t0218200-00	AT2G42580.1	19000166
AT3G14400.1	Os05t0210600-01	AT2G42580.1	19000166
AT3G14400.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000312_P002	Maize	plastid	34.63	79.36
TraesCS1D01G331300.1	Wheat	plastid	74.53	74.3
TraesCS1B01G342600.2	Wheat	plastid	74.38	74.15
HORVU1Hr1G077630.2	Barley	plastid	74.07	73.5
TraesCS1A01G329200.2	Wheat	plastid	73.91	73.34
KXG22316	Sorghum	plastid	66.77	63.52
Zm00001d010710_P002	Maize	plastid	63.51	59.88
GSMUA_Achr9P10330_001	Banana	mitochondrion	51.71	53.45
Zm00001d000313_P001	Maize	nucleus	29.19	50.81
VIT_19s0093g00560.t01	Wine grape	mitochondrion	41.93	42.52
KRH43852	Soybean	nucleus	40.22	40.41
KRH13611	Soybean	nucleus	40.53	40.03
PGSC0003DMT400071055	Potato	mitochondrion	37.73	39.32
Solyc07g056520.2.1	Tomato	cytosol, golgi, nucleus, plastid	40.99	38.48
AT3G14400.1	Thale cress	mitochondrion	38.04	37.07
CDX75770	Canola	mitochondrion, nucleus	37.73	36.6
Bra027341.1-P	Field mustard	mitochondrion	38.82	36.39
CDX97571	Canola	mitochondrion	38.82	35.31
CDX98449	Canola	mitochondrion	38.35	35.09
Os03t0190800-01	Rice	cytosol	14.13	24.86
Os04t0452400-01	Rice	nucleus	13.82	24.25
Os02t0573400-01	Rice	nucleus	13.98	21.69
Os07t0661300-01	Rice	cytosol, plasma membrane	13.98	18.4
Os04t0647300-01	Rice	nucleus	15.37	16.75
Os06t0184300-01	Rice	mitochondrion	22.36	15.58
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	20.34	14.12
Os08t0478500-01	Rice	plastid	20.34	13.39
Os06t0654000-01	Rice	cytosol, nucleus	19.1	13.03
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	19.72	13.03
Os02t0795000-01	Rice	nucleus	21.58	11.73

Protein Annotations

MapMan:19.2.3.1.1.11	Gene3D:3.90.70.10	EntrezGene:4339279	EMBL:AK120186	ProteinID:BAF17922.1	ProteinID:BAS94832.1
MEROPS:C19.A13	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	InterPro:IPR028889	EnsemblPlantsGene:Os05g0510300	EnsemblPlants:Os05t0510300-01	PFAM:PF00443	ScanProsite:PS00972
PFscan:PS50235	PANTHER:PTHR45511	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	UniProt:Q0DGV1	SUPFAM:SSF54001
UniParc:UPI0000E12570	InterPro:USP_CS	InterPro:USP_dom	RefSeq:XP_015640285.1	SEG:seg	:

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os05t0510300-01)

Coordinates

chr5:+:25274418..25280068

Molecular Weight (calculated)

70731.4 Da

IEP (calculated)

9.207

GRAVY (calculated)

-0.470

Length

644 amino acids

Sequence
(BLAST)

001: MAPAVQPPPS PPPPRRPRSG PPPGLKNLGN TCYLNSVLQC LASTPPLATF CLSFRHSNLC KKVLPNKDKE CVFCVVERQI SRLLRTEAGA LDSPAKIIRC
101: LPLFAEHFRW GRQEDAHEFL RYIIDACHTA GLRIRKRLPA SNANGDAGEE EVRVQGPYMV MKETFGGALL SQVKCLTCKG ESNKTDEIMD ISLDLPGSNS
201: VADALARFFQ PEILEGSNKY SCERCKKLTS ARKQLFVLRA PKVLVIQLKR FEGINGGKIN RNIEFKETLF LSDFMYNKNQ DSLPVYNLFG SIVHSGFSPD
301: SGHYYAYVKD AIGRWYCCND SHISPSSSQD VLSEKVYILF YILSTKTQKP STNGYSSSAA KSSNSNGNGI SNATSNEPLK IPLVKQNGLC SSKGIAPPPL
401: KNGKIAPGMH LKPIHLKNNG TGKVSSNGKA SIIPGNKLEV SEGLTLPAVN GRDSGKYAEP GKMNANGSVS CNKTDVNSQR VLPNTNGNGN PIHFSDLQET
501: IDAKATCAEQ YSEKSSIASL EDSKNPVSCH EMSAVIVKDV VSSGKDSSSL KHHLEEGKFK EMLAESASSE LHLSGWVDDV RNFMHTIKRR RLQNTGTPQD
601: SDTMRKELIS ESGRIFRSKI PESLREHLIQ ALRSYYQDKF SLGG

Best Arabidopsis Sequence Match ( AT3G14400.1 )
(BLAST)

001: MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH CDTYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S

Arabidopsis Description

UBP25Ubiquitin carboxyl-terminal hydrolase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.