Factsheet for Os04t0647300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G517600.1	Wheat	mitochondrion	55.33	88.38
TraesCS2B01G544700.1	Wheat	mitochondrion	55.16	88.11
TraesCS2A01G516100.1	Wheat	mitochondrion	55.16	88.11
EES12962	Sorghum	plastid	68.87	72.04
Zm00001d002086_P001	Maize	plastid	67.85	71.23
Solyc07g007640.1.1	Tomato	cytosol	26.57	66.24
VIT_11s0118g00280.t01	Wine grape	mitochondrion	30.29	63.25
HORVU2Hr1G114330.1	Barley	cytosol	55.67	58.75
KRH03615	Soybean	cytosol	50.08	50.0
KRH20191	Soybean	plastid	49.75	49.49
GSMUA_Achr7P17050_001	Banana	plastid	42.3	47.89
VIT_11s0118g00290.t01	Wine grape	nucleus	22.17	37.22
Os04t0452400-01	Rice	nucleus	17.94	28.88
Os03t0190800-01	Rice	cytosol	16.92	27.32
Os02t0573400-01	Rice	nucleus	18.27	26.02
Os07t0661300-01	Rice	cytosol, plasma membrane	15.23	18.4
Os05t0510300-01	Rice	plastid	16.75	15.37
Os08t0478500-01	Rice	plastid	19.29	11.66
Os06t0184300-01	Rice	mitochondrion	17.94	11.47
Os06t0654000-01	Rice	cytosol, nucleus	17.6	11.02
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	16.92	10.78
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	17.43	10.56
Os02t0795000-01	Rice	nucleus	17.77	8.86

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.90.70.10	UniProt:A0A0P0WFP5	ProteinID:BAS91319.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR028889
EnsemblPlantsGene:Os04g0647300	EnsemblPlants:Os04t0647300-01	PFAM:PF00443	ScanProsite:PS00972	PFscan:PS50235	PANTHER:PTHR43961
PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI000393AD02	InterPro:USP_CS
InterPro:USP_dom	SEG:seg	:	:	:	:

Description

Similar to H0811D08.10 protein. (Os04t0647300-01)

Coordinates

chr4:-:32933242..32937209

Molecular Weight (calculated)

67090.5 Da

IEP (calculated)

10.607

GRAVY (calculated)

-0.510

Length

591 amino acids

Sequence
(BLAST)

001: LHPPIPAPLA SHSRAHRLIP HIPRPDDHPV RAAAVPAPRR VPPHHALHSA SLQPAALRVT ARSARPEIRR EHSRAPPLLP LLLPHLLLVP HSTPALSLRR
101: RLLPHQRRLQ RLRLNIRRPP DRRRRRPRRA LLRGVRGSGL RSGLRPRRRP RQVLLPPPPS ASASPSPSPA APRKRRRVEY RAWAPDPAEF ALISSADPTT
201: SASAAAPAGL RGLNNLGNTC FMNSVLQALL HAPPLRNYFL GDRHNRYLCP RQTPMRRRSA EANDKAACLA CDLDEIYSAA FSGERTPYSP AKFLYSWWQH
301: ASNLASYEQQ DAHEFFISIL DHIHENIKDD QHKSLAQGHG DCCIAHRVFS GILRSDVTCT HCGFTSTTFE PCMDISLDLD AGYNNSLGVA NPKVHVRNGE
401: RSSGGTNTKV STLMRCLERF TRAERLDAEQ KFFCERCKER QESLKQMSIR RLPLVSCFHI KRFEHSSVKK MSRKVDHCLQ FPFSLDMAPY LSSSILRSRF
501: GNRIFPSEAS DADSVSEFSS EFEIFAVIMH SGKLEAGHYV TYLRLNNHWY KCDDAWVTRV EEHTVRTSQA YMLFYVQKTL YYKACERATA V

Best Arabidopsis Sequence Match ( AT5G10790.2 )
(BLAST)

001: MSVKSGADVV AVRSNKKRRL DSQLIIGSNF LVSPRDRREK WTFPLGLRGL NNLGSTCFMN AVLQALVHAP PLRNFWLSGQ HNRDLCPRRT MGLLCLPCDL
101: DVIFSAMFSG DRTPYSPAHL LYSWWQHSTN LATYEQQDSH EFFISLLDRI HENEGKSKCL YQDNEECQCI THKAFSGLLR SDVTCTTCGS TSTTYDPFID
201: ISLTLDSMNG FSPADCRKNR YSGGPSVNAI MPTLSGCLDF FTRSEKLGPD QKLNCQSCGE KRESSKQMSI RRLPLLLCLH VKRFEHSLTR KTSRKIDSYL
301: QYPFRLNMSP YLSSSIIGKR FGNRIFAFDG EGEYDSSSSS SPSAEFEIFA VVTHKGMLES GHYVTYLRLK GLWYRCDDAW INEVEEEVVR GCECYMLFYA
401: QETVIQKAHK ELSYQVISMA DAFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.