CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03615	Soybean	cytosol	93.1	93.41
VIT_11s0118g00280.t01	Wine grape	mitochondrion	37.88	79.51
Solyc07g007640.1.1	Tomato	cytosol	30.13	75.53
TraesCS2B01G544700.1	Wheat	mitochondrion	41.75	67.03
TraesCS2D01G517600.1	Wheat	mitochondrion	41.58	66.76
TraesCS2A01G516100.1	Wheat	mitochondrion	41.08	65.95
GSMUA_Achr7P17050_001	Banana	plastid	54.88	62.45
EES12962	Sorghum	plastid	59.26	62.3
Zm00001d002086_P001	Maize	plastid	58.59	61.81
KRH05289	Soybean	nucleus	49.83	53.33
KRH15753	Soybean	nucleus	48.65	52.17
Os04t0647300-01	Rice	nucleus	49.49	49.75
HORVU2Hr1G114330.1	Barley	cytosol	42.26	44.82
KRG97572	Soybean	nucleus	17.0	27.37
KRH43175	Soybean	nucleus	16.84	27.1
KRH59329	Soybean	nucleus	16.84	27.1
KRH31299	Soybean	nucleus	16.67	26.83
KRH72298	Soybean	cytosol, plastid	19.02	22.24
KRH39864	Soybean	cytosol	14.98	16.73
KRH23933	Soybean	cytosol	14.98	16.45
KRH43852	Soybean	nucleus	16.33	15.13
KRH15706	Soybean	golgi, plasma membrane, vacuole	18.35	14.95
KRH13611	Soybean	nucleus	16.16	14.72
KRH05330	Soybean	golgi, plasma membrane	18.18	14.65
KRH61621	Soybean	golgi	18.18	14.56
KRH52289	Soybean	golgi	17.85	14.44
KRH39541	Soybean	nucleus	16.33	13.13
KRH74417	Soybean	nucleus	15.82	13.0
KRH74502	Soybean	golgi, plasma membrane, vacuole	19.87	12.73
KRH69660	Soybean	golgi	19.7	12.47
KRH52893	Soybean	extracellular, golgi, vacuole	18.35	12.27
KRH03060	Soybean	nucleus	18.52	12.18
KRH72452	Soybean	golgi, plasma membrane	20.37	11.68
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	19.36	11.63
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	19.19	11.52
KRH16837	Soybean	golgi	20.03	11.39
KRH62182	Soybean	golgi, vacuole	20.54	10.72

Protein Annotations

EntrezGene:100819341	MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	EMBL:ACUP02008247
MEROPS:C19.A11	EnsemblPlantsGene:GLYMA_13G162300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464
GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234
GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	UniProt:I1LZT3	InterPro:IPR001607	InterPro:IPR013083	InterPro:IPR028889
EnsemblPlants:KRH20191	ProteinID:KRH20191	ProteinID:KRH20191.1	PFAM:PF00443	PFAM:PF02148	ScanProsite:PS00972
ScanProsite:PS00973	PFscan:PS50235	PFscan:PS50271	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	SUPFAM:SSF57850	UniParc:UPI000233B39B	InterPro:USP_CS	InterPro:USP_dom
InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_UBP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:27773991..27778719

Molecular Weight (calculated)

66107.7 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.337

Length

594 amino acids

Sequence
(BLAST)

001: MSSKINGQIS PLPCPHLAEF HRTSAKPFLA LHNCLRIKPP GGRASLRRNP DEVPRCCACG LSAPSRLYAC VTCAAVSCHS SAAGVLSHAA AHAASMPPGH
101: QIAVDVDRAE LFCCACRDQV YDRDFDAAVV IAQTAASTLG GDPPPPIPSP QPENLRKKRR VDYWPWAPDL RERALIGSFS GPIAGAETVV DHSPGLPRGL
201: RGLNNLGNTC FMNSVLQALL HTPPLRNYFL SDRHNRFFCQ KKNNGDVDVD AAVKRSGGNN GNKNARICLA CDMDATFSAV FSGDRAPYSP AKFLYSWWQH
301: AANLATYEQQ DAHEFFISML DGIHEKVEKG RRKPHTEGNG DCCIAHKVFS GILRSDVTCM ACGFTSTTYD PCIDISLDLE PNQWGSTKMA TATSNHSCNG
401: EADCMNSSQI CGTSTLMGCL KRFTRAERLG SDQKIFCRQC QVRQETLKQM SIRKLPLVSC FHIKRFEHSS TRKMPRKVDR YLQFPFSLDM SPYLSSTILR
501: NRFGNRIFPF DGDELDASDE LCSEFELFAV VTHSGKLDAG HYVTYLRLSN RWYKCDDAWV TQVDENIVRA AQCYMMFYVQ KMLYYKATDK HVAS

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.