Factsheet for Zm00001d002086_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12962	Sorghum	plastid	96.45	96.11
TraesCS2D01G517600.1	Wheat	mitochondrion	56.66	86.22
TraesCS2B01G544700.1	Wheat	mitochondrion	56.66	86.22
TraesCS2A01G516100.1	Wheat	mitochondrion	56.66	86.22
Os04t0647300-01	Rice	nucleus	71.23	67.85
Solyc07g007640.1.1	Tomato	cytosol	27.53	65.4
VIT_11s0118g00280.t01	Wine grape	mitochondrion	31.62	62.9
GSMUA_Achr7P17050_001	Banana	plastid	55.59	59.96
KRH03615	Soybean	cytosol	62.17	59.12
KRH20191	Soybean	plastid	61.81	58.59
HORVU2Hr1G114330.1	Barley	cytosol	57.19	57.5
VIT_11s0118g00290.t01	Wine grape	nucleus	35.52	56.82
Zm00001d003476_P002	Maize	cytosol	18.12	27.72
Zm00001d025570_P003	Maize	nucleus	18.12	27.72
Zm00001d000312_P002	Maize	plastid	13.32	26.69
Zm00001d028005_P001	Maize	nucleus	17.23	26.5
Zm00001d016918_P001	Maize	plastid	17.94	24.22
Zm00001d022414_P001	Maize	cytosol	17.94	18.3
Zm00001d051513_P001	Maize	nucleus	18.12	17.26
Zm00001d047023_P001	Maize	nucleus	17.41	15.78
Zm00001d017686_P002	Maize	mitochondrion, nucleus	19.18	14.59
Zm00001d010710_P002	Maize	plastid	17.41	14.35
Zm00001d050489_P001	Maize	nucleus	10.48	12.91
Zm00001d020769_P005	Maize	nucleus	19.54	12.85
Zm00001d045104_P005	Maize	nucleus	19.54	12.18
Zm00001d036707_P006	Maize	plasma membrane	20.43	12.0
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	20.43	11.86
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	20.78	11.63
Zm00001d007096_P007	Maize	mitochondrion	17.41	8.28
Zm00001d000313_P001	Maize	nucleus	3.55	5.41

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	UniProt:A0A1D6DW87	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR001607
InterPro:IPR013083	InterPro:IPR028889	ProteinID:ONM12976.1	PFAM:PF00443	PFAM:PF02148	ScanProsite:PS00972
PFscan:PS50235	PFscan:PS50271	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	SUPFAM:SSF57850	UniParc:UPI000221D29B	InterPro:USP_CS	InterPro:USP_dom	EnsemblPlantsGene:Zm00001d002086
EnsemblPlants:Zm00001d002086_P001	EnsemblPlants:Zm00001d002086_T001	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_UBP	SEG:seg	:

Description

Ubiquitin carboxyl-terminal hydrolase 22

Coordinates

chr2:+:5771336..5775212

Molecular Weight (calculated)

62857.2 Da

IEP (calculated)

8.102

GRAVY (calculated)

-0.330

Length

563 amino acids

Sequence
(BLAST)

001: MSTPSVPPPC PHLAAHRLSS RPLRFLRRCL RVRPLGRPEI RRDPRELPRC SPCSAASPSP TSRLYACLSC AAVFCPSHAA THASASAGPG HQIAVDVDRA
101: ELFCAACGDQ VYDPDFDHAV FLAQSSSLLP STSTSSASAS ASPALRKRRR VDYRAWAPDP AEFALMTSAD PTTSASASAP AGLRGLNNLG NTCFMNSVLQ
201: ALLHAPPLRN YFLGDRHNRF LCPRRTPVRH RASDADRVAC LACDLDEIYS AAFSGDRTPY SPAKFLYSWW QHASNLASYE QQDAHEFFIS ILDHIHENIK
301: DDQQKSYAQG HGDCCIAHRV FSGILRSDVT CTSCGFTSTT FEPCMDISLD MDAGDNSSFG VANTKSHVRN GERGLAGVNS KVLTLMRCLE RFTRSERLDA
401: EQKFFCEHCN ERQESLKQMS IRRLPLVSCF HIKRFEHSSV KKVSRKVDHC LQFPFSLDMA PYLSSSILRS RYGNRIFPAE ASDADAVSEV SSEFEIFAVI
501: THSGKLEAGH YVTYLRLNNH WYKCDDAWVT RVEEHTVRTS QAYMLFYVQK TFYYKACERA ATV

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.