Factsheet for Zm00001d036707_P006

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20513	Sorghum	golgi, plasma membrane	84.97	83.4
GSMUA_Achr7P05090_001	Banana	vacuole	30.9	63.38
Os06t0654000-01	Rice	cytosol, nucleus	57.93	58.79
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	62.94	56.89
PGSC0003DMT400076065	Potato	endoplasmic reticulum	20.35	56.03
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	62.11	55.87
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	61.9	55.16
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	59.5	54.23
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	31.63	48.02
CDY45587	Canola	endoplasmic reticulum, vacuole	31.42	47.55
Bra007837.1-P	Field mustard	nucleus	25.26	47.45
CDY20330	Canola	vacuole	31.21	46.5
CDY34761	Canola	endoplasmic reticulum, vacuole	30.9	45.96
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	31.11	45.78
Bra011290.1-P	Field mustard	vacuole	29.23	45.75
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	30.06	45.64
CDX75188	Canola	vacuole	28.91	45.34
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	31.42	44.79
CDX68773	Canola	nucleus, plasma membrane	28.71	44.79
KRH15706	Soybean	golgi, plasma membrane, vacuole	34.03	44.72
KRH05330	Soybean	golgi, plasma membrane	34.03	44.23
KRH61621	Soybean	golgi	33.09	42.72
Solyc12g096430.1.1	Tomato	nucleus, plastid	27.56	42.44
KRH52289	Soybean	golgi	32.36	42.23
Solyc08g069050.2.1	Tomato	extracellular	32.88	40.54
VIT_04s0069g00760.t01	Wine grape	nucleus	32.46	36.0
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	36.74	31.12
Zm00001d000312_P002	Maize	plastid	8.66	29.54
Zm00001d050489_P001	Maize	nucleus	13.15	27.57
Zm00001d028005_P001	Maize	nucleus	10.44	27.32
Zm00001d003476_P002	Maize	cytosol	10.23	26.63
Zm00001d025570_P003	Maize	nucleus	10.23	26.63
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	25.05	24.74
Zm00001d020769_P005	Maize	nucleus	21.92	24.53
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	24.95	23.76
Zm00001d016918_P001	Maize	plastid	10.23	23.5
Zm00001d051513_P001	Maize	nucleus	12.73	20.64
Zm00001d002086_P001	Maize	plastid	12.0	20.43
Zm00001d010710_P002	Maize	plastid	13.15	18.45
Zm00001d022414_P001	Maize	cytosol	10.54	18.3
Zm00001d045104_P005	Maize	nucleus	16.28	17.28
Zm00001d047023_P001	Maize	nucleus	11.17	17.23
Zm00001d017686_P002	Maize	mitochondrion, nucleus	13.15	17.03
Zm00001d000313_P001	Maize	nucleus	4.38	11.35
Zm00001d007096_P007	Maize	mitochondrion	10.75	8.71

Protein Annotations

EntrezGene:103629692	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	UniProt:A0A1D6LQJ2	ProteinID:AQK81754.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893	InterPro:IPR028889
PFAM:PF00443	PFAM:PF01753	ScanProsite:PS01360	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45499
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI000843879F
InterPro:USP_dom	EnsemblPlantsGene:Zm00001d036707	EnsemblPlants:Zm00001d036707_P006	EnsemblPlants:Zm00001d036707_T006	InterPro:Znf_MYND	SEG:seg

Description

Putative ubiquitin carboxyl-terminal hydrolase superfamily protein

Coordinates

chr6:+:98270691..98281382

Molecular Weight (calculated)

104199.0 Da

IEP (calculated)

5.983

GRAVY (calculated)

-0.384

Length

958 amino acids

Sequence
(BLAST)

001: MLGGGAGGGG AGAGLGLDLS AVIQAAVVGL VLFSAAVVAV RRAASRYFVV DAAGFAASYD DHHHSSPASP MSSKGNRPEQ GGAAADLTGP CAACGVVTSK
101: KCSGCKRVRY CSQECQTKHW QIDHKFKCKQ MKSLDLADKL SCGGEANSKK TSGFGRISLV PACKKISKGQ VLFPYDEFLK LYNWKDLDVV PCGLMNCGNR
201: YIVIIIYIVS FVSFCFANVV LQCLSCTRPL VAYLLGKDHS RECSVRHEDW CFLCELQCHI QRASGSLHPF APTNILSHLP NIGGNLGVGR QEDAHEFMRF
301: AIDKMQSACL DEYGGEKAVD LSIQETTIIQ HIFGGRLQSQ VQCTTCGMVS NRYDNMMDLT VEIQGDAESL ERCLDQFTAV EWLDGDNKYK CDGCNDYVKA
401: RKHLSVQQAP NILTITLKRF QTGRFGKLNK RVTFPMELDL TPYMSCTDGS DLYDLYAVVV HLDMLNASFF GHYICYIKGY QGRWYKIDDC KVMVVDEEEV
501: HAQGAYMLLY SRRTARPRSL LTVDESVKQQ QQCKSLLSNG QSHMILADTT LNCESSLKIP EDMLQQDCES NNESLHEMGI KDQESDMDLR TSIEDDKFIS
601: NGNLRLPGSL VSHVLEDTRA PDSVLEGSVQ LGPPLEGGPT TMSSVQFGNC TSEASSEHSF AEQCEVPASC IDSVDYMDVD TEAGAEVERC DEQRPVLNDS
701: VGRPNNNTAT PTANGVPGEP KPSFSSGFFD KPSRKRSSFT EEASAGSPRK LNGYCNGHIS SLEQEVLCNS GSEKCNGDAP VTSSNGKFCA ANVDMQSIDD
801: SLHEDKRDVP SVSHGFEPRP YKLQSDSNNN CGRTCNGKPK ACQGDMSFLP RGFLGRPSSR GISVKADDSL PFSTDASSSF GNGNSKSSNN SSSMGGLSPG
901: FLTRHRREST VIGTSSDIPM DKKSNGATVV PDHAEKKVSD CTTNGSSFQI RAASDHLD

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.