Factsheet for GSMUA_Achr7P05090_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076065	Potato	endoplasmic reticulum	46.04	61.78
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	59.53	44.06
CDY45587	Canola	endoplasmic reticulum, vacuole	59.53	43.92
AT4G31670.1	Thale cress	endoplasmic reticulum, golgi	59.31	43.9
Bra011290.1-P	Field mustard	vacuole	57.39	43.79
CDY20330	Canola	vacuole	60.17	43.7
CDX75188	Canola	vacuole	57.17	43.7
CDX68773	Canola	nucleus, plasma membrane	57.17	43.49
CDY34761	Canola	endoplasmic reticulum, vacuole	59.31	43.01
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	59.74	42.86
Bra007837.1-P	Field mustard	nucleus	46.25	42.35
AT2G24640.1	Thale cress	endoplasmic reticulum, vacuole	60.6	42.11
KRH15706	Soybean	golgi, plasma membrane, vacuole	63.17	40.47
KRH61621	Soybean	golgi	64.03	40.3
KRH05330	Soybean	golgi, plasma membrane	63.38	40.16
KRH52289	Soybean	golgi	62.53	39.78
Solyc08g069050.2.1	Tomato	extracellular	65.74	39.51
Solyc12g096430.1.1	Tomato	nucleus, plastid	52.46	39.39
VIT_04s0069g00760.t01	Wine grape	nucleus	60.81	32.87
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	75.37	31.12
Zm00001d036707_P006	Maize	plasma membrane	63.38	30.9
KXG20513	Sorghum	golgi, plasma membrane	64.03	30.64
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	22.27	29.55
Os06t0654000-01	Rice	cytosol, nucleus	58.03	28.71
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	62.1	27.36
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	62.1	27.23
TraesCS7B01G405400.1	Wheat	golgi, plasma membrane	62.31	27.07
GSMUA_Achr1P11380_001	Banana	cytosol	21.41	26.81
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	60.17	26.74
GSMUA_Achr10P...	Banana	cytosol	19.7	26.67
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	47.54	26.49
GSMUA_Achr10P...	Banana	golgi	24.84	25.78
GSMUA_Achr7P19010_001	Banana	nucleus	25.05	25.43
GSMUA_Achr8P14390_001	Banana	cytosol	19.91	25.41
GSMUA_Achr10P...	Banana	nucleus	20.34	25.4
GSMUA_Achr10P...	Banana	nucleus	22.06	25.37
GSMUA_Achr7P19160_001	Banana	mitochondrion	16.49	25.25
GSMUA_Achr7P05330_001	Banana	cytosol	17.13	25.08
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	20.56	24.87
GSMUA_Achr5P22990_001	Banana	vacuole	45.82	23.8
GSMUA_Achr2P20080_001	Banana	plasma membrane	47.11	23.38
GSMUA_Achr8P09770_001	Banana	cytosol	21.41	23.36
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	43.68	22.03
GSMUA_AchrUn_...	Banana	golgi, vacuole	47.54	21.92
GSMUA_Achr3P04660_001	Banana	nucleus	28.05	21.83
GSMUA_Achr7P19170_001	Banana	cytosol	6.21	21.64
GSMUA_Achr7P17050_001	Banana	plastid	22.7	20.31
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	24.41	19.45
GSMUA_Achr9P10330_001	Banana	mitochondrion	25.05	18.78
GSMUA_Achr4P01920_001	Banana	nucleus	28.91	13.98
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	22.27	12.25

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G05090_001	EnsemblPlants:GSMUA_Achr7P05090_001	EnsemblPlants:GSMUA_Achr7T05090_001	InterPro:IPR002893
InterPro:IPR028889	UniProt:M0TEU9	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235
PFscan:PS50865	PANTHER:PTHR45499	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001
TMHMM:TMhelix	UniParc:UPI00029662E3	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND	:

Description

Ubiquitin carboxyl-terminal hydrolase 19 [Source:GMGC_GENE;Acc:GSMUA_Achr7G05090_001]

Coordinates

chr7:+:3797766..3804678

Molecular Weight (calculated)

53098.7 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.230

Length

467 amino acids

Sequence
(BLAST)

001: MLPAVDPSAL LRFVLSAILI FSGALLLVKR AASRYFVVDA GFEAGSGFEG PRRAMCVGEE DGCAACGRPA SKKCSRCMAV RYCSQACQSK HWKSDRRFCC
101: EQSKSTVEVT LSESQQFSSI SLMPACGTRN ILQKSTKILF PYEEFVKLFN WDNPGFTPCG LVNCGNSCFA NVVLQCLTST RPLMAYLLKR THSRECNVSK
201: RDGWCFLCEL QFHVQRARES MHPFSPINIL SGLHNIGGNL DYGRQEDAHE FMRFAIDRMQ SVCLDEFGGE KTVDTRTQGT TLIQYIFGGR LQSQVTCTKC
301: NMVSNRFENM MDLTVEIQGD VESLEECLDQ FTIKEWLDGE NKYKCDGCND YVKAWKRLTV NQAPNILTIT LKRFQSGRFG KLNKRVTFPQ NLDLTPYMSE
401: DGDGTDIYTL YAVVVHLDML NASFFGHYIC YTKDYHGRWY RIDDCEVINV EVEDVLSERA YMLLYSR

Best Arabidopsis Sequence Match ( AT2G24640.1 )
(BLAST)

001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ

Arabidopsis Description

UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.