Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14390_001 | Banana | cytosol | 92.46 | 87.16 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 93.04 | 86.99 |
| KRH59329 | Soybean | nucleus | 91.88 | 85.91 |
| KRH43175 | Soybean | nucleus | 91.59 | 85.64 |
| Zm00001d003476_P002 | Maize | cytosol | 91.3 | 85.6 |
| EES12269 | Sorghum | cytosol | 91.01 | 85.33 |
| KRG97572 | Soybean | nucleus | 91.01 | 85.09 |
| KRH31299 | Soybean | nucleus | 90.72 | 84.82 |
| Bra038533.1-P | Field mustard | nucleus | 87.25 | 84.79 |
| Os04t0452400-01 | Rice | nucleus | 90.14 | 84.74 |
| Zm00001d025570_P003 | Maize | nucleus | 90.14 | 84.51 |
| CDY13770 | Canola | nucleus | 86.96 | 84.27 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 74.49 | 84.26 |
| PGSC0003DMT400032703 | Potato | nucleus | 88.99 | 83.88 |
| AT2G22310.1 | Thale cress | nucleus | 88.7 | 83.84 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 89.57 | 83.51 |
| AT4G39910.1 | Thale cress | nucleus | 89.57 | 83.29 |
| Solyc01g105240.2.1 | Tomato | nucleus | 88.12 | 83.06 |
| CDX76934 | Canola | nucleus | 85.22 | 83.05 |
| CDY68864 | Canola | nucleus | 88.99 | 82.53 |
| Bra010647.1-P | Field mustard | nucleus | 88.99 | 82.53 |
| Zm00001d028005_P001 | Maize | nucleus | 87.54 | 82.51 |
| CDX69375 | Canola | nucleus | 88.7 | 82.48 |
| Os03t0190800-01 | Rice | cytosol | 87.25 | 82.24 |
| EER92723 | Sorghum | nucleus | 86.96 | 81.97 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 85.51 | 80.6 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 85.22 | 80.33 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 85.22 | 80.33 |
| GSMUA_Achr10P... | Banana | nucleus | 86.96 | 80.21 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 84.93 | 80.05 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 84.93 | 80.05 |
| CDY63898 | Canola | nucleus | 88.41 | 76.63 |
| HORVU2Hr1G079230.7 | Barley | mitochondrion | 89.86 | 74.88 |
| GSMUA_Achr7P19170_001 | Banana | cytosol | 27.54 | 70.9 |
| Bra011823.1-P | Field mustard | nucleus | 87.83 | 68.71 |
| Zm00001d016918_P001 | Maize | plastid | 79.71 | 65.95 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 77.97 | 65.93 |
| TraesCS6D01G187000.1 | Wheat | nucleus, plastid | 77.68 | 65.69 |
| HORVU6Hr1G050090.1 | Barley | nucleus, plastid | 77.39 | 65.44 |
| EES07024 | Sorghum | mitochondrion | 79.42 | 65.39 |
| Os02t0573400-01 | Rice | nucleus | 76.52 | 63.61 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 88.99 | 63.04 |
| TraesCS6B01G223900.1 | Wheat | plastid | 76.23 | 62.77 |
| GSMUA_Achr7P05330_001 | Banana | cytosol | 22.9 | 24.76 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 25.8 | 23.86 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 24.06 | 23.58 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 25.8 | 20.79 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 26.67 | 19.7 |
| GSMUA_Achr7P17050_001 | Banana | plastid | 24.64 | 16.28 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 27.83 | 16.0 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 25.51 | 15.02 |
| GSMUA_Achr9P10330_001 | Banana | mitochondrion | 26.38 | 14.61 |
| GSMUA_Achr10P... | Banana | nucleus | 16.81 | 14.29 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 18.55 | 13.91 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 28.7 | 11.81 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 29.86 | 11.46 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 28.99 | 10.63 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 28.41 | 10.58 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 28.41 | 10.14 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 27.54 | 9.38 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 22.32 | 9.07 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 9.57 | 8.55 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 27.25 | 8.31 |
| GSMUA_Achr10P... | Banana | golgi | 10.43 | 8.0 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSMUA_Achr10G30410_001 | EnsemblPlants:GSMUA_Achr10P30410_001 | EnsemblPlants:GSMUA_Achr10T30410_001 | InterPro:IPR028889 |
| UniProt:M0RMR5 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR43942 |
| PANTHER:PTHR43942:SF2 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0002953772 | InterPro:USP_CS |
| InterPro:USP_dom | : | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G30410_001]
Coordinates
chr10:-:32622396..32634999
Molecular Weight (calculated)
39718.2 Da
IEP (calculated)
6.373
GRAVY (calculated)
-0.401
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAGSKLEK ALGDQFPEGE RYFGLENFGN TCYCNSVLQA LYFCIPFREQ LLDYYANNKN LGDVEENLLT CLADLFTQIS SQKKKTGVIA PKRFVQRVKK
101: QNEYFRSYMH QDAHEFLNFL LNELVDILEK DHPVANGVQK EPLVTWVHKN FQGILTNETR CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL
201: NAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYI EQLGRYKKLS YRVVFPMELK LTNTVEDADS EYSLFAVVVH VGSGPNHGHY VSLVKSHNHW
301: LLFDDENVEM IDESTVQTFF GSSQEFSGNT DHGYILFYER LGGKS
101: QNEYFRSYMH QDAHEFLNFL LNELVDILEK DHPVANGVQK EPLVTWVHKN FQGILTNETR CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL
201: NAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYI EQLGRYKKLS YRVVFPMELK LTNTVEDADS EYSLFAVVVH VGSGPNHGHY VSLVKSHNHW
301: LLFDDENVEM IDESTVQTFF GSSQEFSGNT DHGYILFYER LGGKS
001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
Arabidopsis Description
UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.