Factsheet for GSMUA_Achr10P19120_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	80.21	86.96
GSMUA_Achr8P14390_001	Banana	cytosol	82.89	84.7
Os04t0452400-01	Rice	nucleus	81.82	83.38
PGSC0003DMT400032703	Potato	nucleus	81.55	83.33
EES12269	Sorghum	cytosol	81.28	82.61
Zm00001d003476_P002	Maize	cytosol	81.28	82.61
Zm00001d025570_P003	Maize	nucleus	81.28	82.61
Solyc01g105240.2.1	Tomato	nucleus	80.21	81.97
AT4G39910.1	Thale cress	nucleus	81.28	81.94
CDY13770	Canola	nucleus	77.81	81.74
CDX69375	Canola	nucleus	81.02	81.67
TraesCS2A01G340100.1	Wheat	cytosol	80.75	81.62
CDY68864	Canola	nucleus	81.02	81.45
Bra010647.1-P	Field mustard	nucleus	81.02	81.45
AT2G22310.1	Thale cress	nucleus	79.41	81.37
Bra038533.1-P	Field mustard	nucleus	77.01	81.13
CDX76934	Canola	nucleus	76.2	80.51
GSMUA_Achr7P19160_001	Banana	mitochondrion	65.51	80.33
Zm00001d028005_P001	Maize	nucleus	78.07	79.78
TraesCS4A01G406600.1	Wheat	cytosol	77.81	79.51
HORVU4Hr1G078590.1	Barley	cytosol	77.81	79.51
Os03t0190800-01	Rice	cytosol	77.54	79.23
TraesCS4B01G306100.1	Wheat	cytosol	77.27	78.96
TraesCS7D01G125700.1	Wheat	nucleus	77.01	78.69
TraesCS4D01G304300.1	Wheat	cytosol	77.01	78.69
EER92723	Sorghum	nucleus	77.01	78.69
CDY63898	Canola	nucleus	81.02	76.13
HORVU2Hr1G079230.7	Barley	mitochondrion	81.28	73.43
Bra011823.1-P	Field mustard	nucleus	80.48	68.25
GSMUA_Achr7P19170_001	Banana	cytosol	23.8	66.42
TraesCS6A01G203500.1	Wheat	nucleus, plastid	70.59	64.71
TraesCS6D01G187000.1	Wheat	nucleus, plastid	70.32	64.46
HORVU6Hr1G050090.1	Barley	nucleus, plastid	70.05	64.22
Zm00001d016918_P001	Maize	plastid	71.12	63.79
EES07024	Sorghum	mitochondrion	71.12	63.48
CDY68683	Canola	endoplasmic reticulum, vacuole	81.02	62.22
TraesCS6B01G223900.1	Wheat	plastid	69.52	62.05
Os02t0573400-01	Rice	nucleus	68.72	61.93
GSMUA_Achr7P05330_001	Banana	cytosol	21.39	25.08
GSMUA_Achr1P11380_001	Banana	cytosol	24.87	24.93
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	21.39	22.73
GSMUA_Achr8P09770_001	Banana	cytosol	24.33	21.26
GSMUA_Achr7P05090_001	Banana	vacuole	25.4	20.34
GSMUA_Achr7P17050_001	Banana	plastid	23.8	17.05
GSMUA_Achr3P04660_001	Banana	nucleus	24.87	15.5
GSMUA_Achr9P10330_001	Banana	mitochondrion	23.8	14.29
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	22.19	14.16
GSMUA_Achr7P19010_001	Banana	nucleus	17.38	14.13
GSMUA_Achr10P...	Banana	nucleus	15.24	14.04
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	25.94	11.58
GSMUA_Achr5P22990_001	Banana	vacuole	27.54	11.46
GSMUA_Achr2P20080_001	Banana	plasma membrane	26.74	10.63
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	25.67	10.37
GSMUA_Achr4P01920_001	Banana	nucleus	25.67	9.94
GSMUA_AchrUn_...	Banana	golgi, vacuole	26.2	9.67
GSMUA_Achr10P...	Banana	golgi	10.7	8.89
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	20.05	8.83
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	8.82	8.55
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	25.4	8.4

Protein Annotations

MapMan:19.2.3.1.1.2	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:GSMUA_Achr10G19120_001	EnsemblPlants:GSMUA_Achr10P19120_001	EnsemblPlants:GSMUA_Achr10T19120_001	InterPro:IPR028889
UniProt:M0RJI7	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR43942
PANTHER:PTHR43942:SF2	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI0002968204	InterPro:USP_CS
InterPro:USP_dom	SEG:seg	:	:	:	:

Description

Ubiquitin carboxyl-terminal hydrolase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G19120_001]

Coordinates

chr10:+:25616711..25622996

Molecular Weight (calculated)

42787.4 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.482

Length

374 amino acids

Sequence
(BLAST)

001: MVMGATGSKL EKALGEQFPE GERYFGLENF GNTCYCNSVL QVLYFCIPFR EQLLDYYENN KNVGDAEENL LTCLADLFSQ ISSQKKKTGV ISPRRFVQRV
101: KKQNELFRSY MHQDAHEFLN FLLNELVDTL ERESNAANSS PEASSSSSSS SSEKVANGPS NPPVNGLRKD PFVTWVHDSF QGILTNETRC LRCETVTARD
201: ETFFDLSLDI EQNSSITSCL KNFSSTETLN AEDKFFCDKC CSLQEAQKRM KIKKPPSILV IHLKRFKYIE HLGRNKKLSY RVVFPMELKL MNTVEDPDTE
301: YSLFAVVVHI GTGPNHGHYV SLVKSHNHWL YFDDETVEMI DELTMHKYFG SSQEYPSNTE HGYILFYESL GKSS

Best Arabidopsis Sequence Match ( AT4G39910.1 )
(BLAST)

001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K

Arabidopsis Description

UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.