Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 20.63 | 51.48 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 22.31 | 49.13 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 21.92 | 47.54 |
| GSMUA_Achr10P... | Banana | golgi | 20.43 | 46.0 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 16.49 | 43.26 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 30.9 | 41.73 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 36.72 | 41.38 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 30.01 | 41.08 |
| CDY08792 | Canola | vacuole | 29.81 | 40.32 |
| CDY14564 | Canola | golgi | 30.21 | 40.16 |
| Bra024386.1-P | Field mustard | golgi | 29.91 | 39.5 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 34.16 | 38.32 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 32.87 | 35.92 |
| KRH69660 | Soybean | golgi | 32.87 | 35.5 |
| KRH72452 | Soybean | golgi, plasma membrane | 35.44 | 34.65 |
| KRH16837 | Soybean | golgi | 35.54 | 34.45 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 29.81 | 34.01 |
| CDY11021 | Canola | golgi | 32.87 | 33.0 |
| CDX92643 | Canola | golgi | 32.97 | 32.97 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 32.68 | 32.84 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 27.15 | 32.82 |
| Bra019219.1-P | Field mustard | golgi | 32.77 | 32.81 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 39.39 | 32.57 |
| KRH62182 | Soybean | golgi, vacuole | 36.23 | 32.25 |
| CDY03441 | Canola | golgi | 32.18 | 32.18 |
| Solyc04g076210.2.1 | Tomato | nucleus | 34.55 | 31.85 |
| Bra013814.1-P | Field mustard | golgi | 31.98 | 31.76 |
| CDY34291 | Canola | golgi | 31.98 | 31.76 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 26.16 | 28.62 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 26.16 | 28.16 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 9.67 | 27.84 |
| GSMUA_Achr10P... | Banana | cytosol | 9.38 | 27.54 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 9.58 | 26.5 |
| GSMUA_Achr10P... | Banana | nucleus | 9.67 | 26.2 |
| GSMUA_Achr7P05330_001 | Banana | cytosol | 8.0 | 25.39 |
| GSMUA_Achr7P19170_001 | Banana | cytosol | 3.36 | 25.37 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 9.28 | 25.2 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 7.4 | 24.59 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 13.33 | 22.5 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 23.99 | 21.49 |
| GSMUA_Achr7P17050_001 | Banana | plastid | 10.96 | 21.26 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 8.98 | 21.26 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 11.75 | 20.31 |
| GSMUA_Achr9P10330_001 | Banana | mitochondrion | 12.44 | 20.22 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 13.33 | 13.98 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 11.15 | 13.31 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_AchrUn_randomG15870_001 | EnsemblPlants:GSMUA_AchrUn_randomP15870_001 | EnsemblPlants:GSMUA_AchrUn_randomT15870_001 |
| InterPro:IPR002893 | InterPro:IPR028889 | UniProt:M0U9J6 | PFAM:PF00443 | PFAM:PF01753 | PFscan:PS50235 |
| PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 |
| UniParc:UPI000295184B | InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15870_001]
Coordinates
chrchrUn_random:-:75485919..75499900
Molecular Weight (calculated)
111360.0 Da
IEP (calculated)
7.883
GRAVY (calculated)
-0.439
Length
1013 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPLGFALVA LVLGPLLALV ARRRWRRAAA RRAEVMRLAL LAAEEAARAE EALWLGCRSP LPVVGGGGPK MAVCAVCRSP TTTRCSRCKA VRYCSRTCQI
0101: IHWRQGHKNV CCSPSVDDHY DGLDGVTRPK ELPAERSKIC NGSLRTGGTS QEAVMSFSKK LSSESSYSSE AFSDDEFMDS SGTESTSDSS SNSSSSSCSM
0201: FAVPVGSFVD SSSTAHPTLL HKTGIREHSS SDVSAKKLST KVDKRTSSFA SGEVECSRGS NLIGSESCSN IKSSKDGGQC ENGTFGPSVS QSNRTVESTE
0301: FEVYQEIHHY HSDVTPQLQS SNLSDETIRS QTKSRNEILS SRTSMLGAID RTSSSASITE SEGLDSLRSY GVQLVQSKSL MSLSSAIADQ VSLAGNSMSN
0401: DASKKVENAP KAPMKLYQNA GSHSSDIKTS VQRVVQQLKL SKVSRQHRSS SGYDFSKKIK MLFPYDYFVK LYNFDKVVLR PSGLINCHNS CYANAVLQCL
0501: AFTPPLTAYL LQGLHSKTCI EWCFTCELEN LLMKAKLGES PLSPAGILSH MHEIGSHLGH GREEDAHEFL RYAIDAMQSV CLKEAGAHAV DHYWAEETTL
0601: IQLTFGGYLQ SKIKCMKCHS RSERYERLMD LTVEIEGHVG TLEEALRRFT TTEILDGENK YHCLRCKSYE RAKKKLTIVD APNILTIALK RFQSGKFGKL
0701: NKAVCFPEYL DLAPYMHGSN DKSPMYKLYA VVVHLDVMNA SFSGHYVCYV KNRQGKWYKT DDSTVKPVDL ETVLSKNAYM LLYARCSPHP PSLISSTLSP
0801: DQIVSKRSRS KEVFCSGSDG EKASSNAVTA MSDLPSAHHR NQAEPNWTTG YHFSYEPNNF LNGIFCVPKS DSSSDSSSLI SCSDEASCST ESTRNSTSTD
0901: EYSEYIFGDL DRQSWNGSLR LSNDVDGSVS PSLYSNHSSE AASYKADGVV DDRVWDLQDG GSPILFSDTT NQCRKLTDCG RSRDTGWVTP SKLKPSVLRR
1001: SCTASKRTAE TFY
0101: IHWRQGHKNV CCSPSVDDHY DGLDGVTRPK ELPAERSKIC NGSLRTGGTS QEAVMSFSKK LSSESSYSSE AFSDDEFMDS SGTESTSDSS SNSSSSSCSM
0201: FAVPVGSFVD SSSTAHPTLL HKTGIREHSS SDVSAKKLST KVDKRTSSFA SGEVECSRGS NLIGSESCSN IKSSKDGGQC ENGTFGPSVS QSNRTVESTE
0301: FEVYQEIHHY HSDVTPQLQS SNLSDETIRS QTKSRNEILS SRTSMLGAID RTSSSASITE SEGLDSLRSY GVQLVQSKSL MSLSSAIADQ VSLAGNSMSN
0401: DASKKVENAP KAPMKLYQNA GSHSSDIKTS VQRVVQQLKL SKVSRQHRSS SGYDFSKKIK MLFPYDYFVK LYNFDKVVLR PSGLINCHNS CYANAVLQCL
0501: AFTPPLTAYL LQGLHSKTCI EWCFTCELEN LLMKAKLGES PLSPAGILSH MHEIGSHLGH GREEDAHEFL RYAIDAMQSV CLKEAGAHAV DHYWAEETTL
0601: IQLTFGGYLQ SKIKCMKCHS RSERYERLMD LTVEIEGHVG TLEEALRRFT TTEILDGENK YHCLRCKSYE RAKKKLTIVD APNILTIALK RFQSGKFGKL
0701: NKAVCFPEYL DLAPYMHGSN DKSPMYKLYA VVVHLDVMNA SFSGHYVCYV KNRQGKWYKT DDSTVKPVDL ETVLSKNAYM LLYARCSPHP PSLISSTLSP
0801: DQIVSKRSRS KEVFCSGSDG EKASSNAVTA MSDLPSAHHR NQAEPNWTTG YHFSYEPNNF LNGIFCVPKS DSSSDSSSLI SCSDEASCST ESTRNSTSTD
0901: EYSEYIFGDL DRQSWNGSLR LSNDVDGSVS PSLYSNHSSE AASYKADGVV DDRVWDLQDG GSPILFSDTT NQCRKLTDCG RSRDTGWVTP SKLKPSVLRR
1001: SCTASKRTAE TFY
0001: MLLVLDLGIS SLVLVVSLVL PLIGLFVRHK WRVAAQRREE IRRLLIHASE EAARAELEAS VEFSSVAVSN VFHCPVCYCL ATTRCSRCKA VRYCSGKCQI
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
0101: IHWRQGHKDE CHPASIVYDS EDESDSDLRL GEENGQNTPE ETLLVGPEPV TIPIGESLLS NRARSPEDGN GDIADNKDDL IDKEEAVSVA ETSGSSFSGF
0201: SSSPRNDSGD EISRCESFSS SESERSESLL DAHVSVEPED TCFSTIEDAP SKLLSPKFVH LVESVDNLAN LPKLSVHKPE DDAGQNQSQS RSLHSLVTDR
0301: HPVSADPSLK SSDFWGTALG SAERVSDSCV KSKSGRPGNS SLHFSFGSGS SRDTSAAKVS EQRSSILKEA PRGTGYISDG VNLRERNAKR FDEAEIALPI
0401: SSSTDALSPL DSSNLSHVTL PKSKSASSEN GSMLAPLKVG EVQLLASKAS NTKKCADLMK HSPLGAKSVR VLDHQKQNGA VVQHINSLHG RSGLKASVLK
0501: VVDQWTRPKS ENEMAGRHGH KGLFPYEVFA KLYTYKIEFQ PCGLINVGNS CFANVVFQCL MFTPPLTTYF LQQFHSRACT KKEQCFTCGF EKLVVKAKEE
0601: KSPLSPNGLL SQLQNIGIFL GNGKEEDAHE FLRFVVDTMQ SVCIKASEYD MTKSSKLEDT TLIGLTFGGY LRSKIKCMKC QVKSELREKM MDLTVEIDGD
0701: ISTLDDALRR FTRTEILDGE NKYRCGSCKS YERAKKKLKI TEPPNVLTIA LKRFQAGKFG KLNKLIRFPE TLDLAPYVSG GSEKSHDYKL YGVIVHLDVM
0801: NAAFSGHYVC YIRNQNKWYK ADDSTVVTSD VERILTKGAY MLFYARCTPT PPRLAVCTKT EASNKKSRVP LPKANEKSTI SRSVSTSSPE LSSNTPGGGR
0901: SGNIQSFYSS FQRLQKILEE DSASDSSSLF DSNSDECSCS TDSTSMDDFA DFIFGDHQGR AHGQSETPSP TSSSSSSSPP FTRRSPLSRS SPETYGTSRH
1001: QLPLGGER
Arabidopsis Description
UBP16Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB51]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.