CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74502	Soybean	golgi, plasma membrane, vacuole	92.32	93.42
VIT_00s0199g00030.t01	Wine grape	vacuole	47.97	49.83
VIT_00s0407g00030.t01	Wine grape	golgi, vacuole	38.59	48.92
AT5G65450.2	Thale cress	endoplasmic reticulum, golgi, mitochondrion, nucleus	37.95	47.47
CDY08792	Canola	vacuole	36.67	45.93
CDY14564	Canola	golgi	36.67	45.14
Bra024386.1-P	Field mustard	golgi	36.89	45.11
Zm00001d050489_P001	Maize	nucleus	18.98	38.95
GSMUA_Achr5P22990_001	Banana	vacuole	36.89	38.49
GSMUA_Achr10P...	Banana	golgi	18.44	38.44
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	15.78	38.34
GSMUA_Achr10P...	Banana	nucleus	16.52	38.18
GSMUA_Achr7P19010_001	Banana	nucleus	18.23	37.17
KRH72452	Soybean	golgi, plasma membrane	39.87	36.1
KRH52893	Soybean	extracellular, golgi, vacuole	33.69	35.59
KRH16837	Soybean	golgi	39.45	35.41
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	27.72	35.28
OQU80649	Sorghum	nucleus	29.74	34.62
KRH62182	Soybean	golgi, vacuole	41.68	34.36
KRH15706	Soybean	golgi, plasma membrane, vacuole	26.01	33.47
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	33.05	33.41
Solyc04g076210.2.1	Tomato	nucleus	38.7	33.03
GSMUA_AchrUn_...	Banana	golgi, vacuole	35.5	32.87
KRH52289	Soybean	golgi	25.69	32.83
KRH61621	Soybean	golgi	25.91	32.75
KRH05330	Soybean	golgi, plasma membrane	25.69	32.7
Os08t0478500-01	Rice	plastid	33.9	32.52
Zm00001d020769_P005	Maize	nucleus	29.21	32.01
TraesCS7A01G282200.4	Wheat	plastid	33.37	31.65
TraesCS7B01G179000.2	Wheat	plastid	33.48	31.62
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	30.28	31.38
TraesCS5B01G243400.1	Wheat	vacuole	30.6	31.33
TraesCS7D01G280800.4	Wheat	plastid	33.05	31.25
OQU89635	Sorghum	vacuole	29.42	30.26
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	31.66	29.91
TraesCS5A01G246000.3	Wheat	vacuole	30.6	29.83
KRH72298	Soybean	cytosol, plastid	14.82	27.36
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	28.68	27.2
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	28.36	26.87
KRG97572	Soybean	nucleus	10.55	26.83
KRH59329	Soybean	nucleus	10.55	26.83
KRH43175	Soybean	nucleus	10.55	26.83
KRH31299	Soybean	nucleus	10.55	26.83
KRH23933	Soybean	cytosol	11.94	20.7
KRH39864	Soybean	cytosol	11.62	20.49
KRH15753	Soybean	nucleus	11.94	20.22
KRH05289	Soybean	nucleus	11.73	19.82
KRH43852	Soybean	nucleus	13.54	19.81
KRH20191	Soybean	plastid	12.47	19.7
KRH13611	Soybean	nucleus	13.65	19.63
KRH03615	Soybean	cytosol	12.26	19.43
KRH03060	Soybean	nucleus	16.63	17.28
KRH74417	Soybean	nucleus	13.22	17.15
KRH39541	Soybean	nucleus	13.43	17.05

Protein Annotations

EntrezGene:100811058	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EMBL:ACUP02000727	EnsemblPlantsGene:GLYMA_02G040900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893
InterPro:IPR028889	UniProt:K7K6D3	EnsemblPlants:KRH69660	ProteinID:KRH69660	ProteinID:KRH69660.1	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI0002336E55	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:3849728..3857260

Molecular Weight (calculated)

104345.0 Da

IEP (calculated)

8.269

GRAVY (calculated)

-0.540

Length

938 amino acids

Sequence
(BLAST)

001: MLVPGILGFH GLVYVVLALG FAVIRHVWRN VEAKREEEGM MMMMRMVADA DVTETEVAET AEVTVASEVE YSSPVPVDGS RWFQCAVCCA PTTMRCSRCK
101: AVRYCSGKCQ ISHWRLGHKD ECCPPTTTME LKDKNLSSRA SVSKTESGLH EINGTHAGIS SSNDSYSSPD PLVAARKSFD DNHHSRFAKP VCNDTTDYTS
201: AASAHNKETV NMKCSENIEV KDSSASKRSK PNPSNATDET RFKSKFPKTK SDASHDEAAN LGSHERRRKA AIVEKSATDT SKCKTVSHLS GSSKYAVIDD
301: VEEESHLPKY REARRSSSSS RDRLSSATKG DFSSQSKCMT TDNNHTLPTK VSAIPNLPQN VRSGLKTSMQ KVVQQFRSSK ESRSNSISAE NEMGFPYELF
401: VELYCYDKMK LFPFGLTNCG NSCYANAVLQ CLAYTRPLTS YLFQGFHSKR CQKKGWCFTC EFEYLIQKAK EGISPLSPIG ILSKIHKIGS HLGRGREEDA
501: HEFLRCVVDT MQSICLKEVG VSSPLAEETT LVSYTFGGYL RSKIKCLRCL GKSERYERMM DLTVEIDGDI GTLEEALGQF TAPEILDKDN KYNCSRCKTY
601: VKARKKLTVL EAPNILTIVL KRFQSGNFEK LNKSVQFPEV LNMAPYMSGT KDKSPLYSLY AVVVHLDLDI MNAAFSGHYV CYVKNIQGEW FRTDDSRVEP
701: VELSRVLSER AYMLLYARHS PKPLGLVSSN VISSAGKFKR RNLEAIPATS KTRSNSMATS GYSPSPQQKH GKYPNWNDAD DSLSNDFAYP EEWRFQYGVR
801: NTMVDSSSES SLFSSSDASS CSTASIKDSA SSADFSDYIF GEVGPNWYSH YGLSSNMGAS SSYDNLDTDF LVDSNGGASR RLQQDSEDKA VLYANKSKNH
901: SGSRGIDLKR YITANHYDKK SGVHVRRTSG DASAQTFY

Best Arabidopsis Sequence Match ( AT5G65450.2 )
(BLAST)

001: MPVSLESETL GFRCLLIGCM MLVFLLIRRQ WRSASVRREE VIRLIALATE ESYLAEEVRP ATVDYGGDSV SDVYRCAVCL YPTTTRCSQC KSVRYCSSKC
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD

Arabidopsis Description

UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.