CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23933	Soybean	cytosol	93.42	91.87
GSMUA_Achr1P11380_001	Banana	cytosol	51.32	73.19
CDX72275	Canola	cytosol	48.68	70.0
Bra024037.1-P	Field mustard	cytosol	48.12	64.0
GSMUA_Achr8P09770_001	Banana	cytosol	49.62	61.68
VIT_13s0019g01690.t01	Wine grape	cytosol	63.35	60.94
CDY23262	Canola	nucleus	58.27	56.67
Solyc01g068240.2.1	Tomato	cytosol	56.02	55.91
Bra010268.1-P	Field mustard	cytosol	59.77	55.89
OQU81355	Sorghum	cytosol, nucleus, plastid	8.08	55.13
AT4G30890.2	Thale cress	cytosol	56.2	54.27
CDY36465	Canola	cytosol	59.21	53.66
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	58.65	52.88
CDY28224	Canola	endoplasmic reticulum, vacuole	58.65	52.88
CDX68701	Canola	endoplasmic reticulum, extracellular	58.27	51.93
PGSC0003DMT400033175	Potato	mitochondrion	16.17	51.5
PGSC0003DMT400033184	Potato	cytosol	17.48	50.82
Zm00001d022414_P001	Maize	cytosol	51.5	49.64
Os07t0661300-01	Rice	cytosol, plasma membrane	45.3	49.28
PGSC0003DMT400033182	Potato	cytosol	12.78	48.23
PGSC0003DMT400033173	Potato	mitochondrion	25.0	37.46
TraesCS2A01G127200.3	Wheat	cytosol	51.5	36.63
HORVU2Hr1G022340.2	Barley	cytosol	51.32	35.97
TraesCS2D01G129600.2	Wheat	cytosol	51.5	35.54
TraesCS2B01G149000.2	Wheat	cytosol	51.5	35.54
KRH31299	Soybean	nucleus	17.86	25.75
KRH43175	Soybean	nucleus	17.86	25.75
KRH59329	Soybean	nucleus	17.86	25.75
KRG97572	Soybean	nucleus	17.48	25.2
Zm00001d007096_P007	Maize	mitochondrion	50.19	22.57
KRH72298	Soybean	cytosol, plastid	18.23	19.09
KRH05289	Soybean	nucleus	16.73	16.04
KRH15753	Soybean	nucleus	16.54	15.88
KRH20191	Soybean	plastid	16.73	14.98
KRH03615	Soybean	cytosol	16.54	14.86
KRH43852	Soybean	nucleus	17.11	14.2
KRH13611	Soybean	nucleus	16.92	13.8
KRH52289	Soybean	golgi	18.23	13.22
KRH61621	Soybean	golgi	18.42	13.21
KRH15706	Soybean	golgi, plasma membrane, vacuole	18.05	13.17
KRH05330	Soybean	golgi, plasma membrane	18.05	13.03
KRH39541	Soybean	nucleus	16.54	11.91
KRH74417	Soybean	nucleus	16.17	11.89
KRH69660	Soybean	golgi	20.49	11.62
KRH74502	Soybean	golgi, plasma membrane, vacuole	19.92	11.43
KRH03060	Soybean	nucleus	18.42	10.85
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	19.92	10.72
KRH52893	Soybean	extracellular, golgi, vacuole	17.86	10.7
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	19.74	10.61
KRH72452	Soybean	golgi, plasma membrane	19.74	10.14
KRH16837	Soybean	golgi	19.74	10.05
KRH62182	Soybean	golgi, vacuole	19.36	9.05

Protein Annotations

EntrezGene:100799656	MapMan:19.2.3.1.1.10	Gene3D:3.90.70.10	EMBL:ACUP02006008	MEROPS:C19.A14	EnsemblPlantsGene:GLYMA_09G225200
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459
UniProt:I1L5I7	InterPro:IPR028889	EnsemblPlants:KRH39864	ProteinID:KRH39864	ProteinID:KRH39864.1	PFAM:PF00443
ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR44747	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	UniParc:UPI000233801C	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:44977000..44981764

Molecular Weight (calculated)

58627.4 Da

IEP (calculated)

7.522

GRAVY (calculated)

-0.431

Length

532 amino acids

Sequence
(BLAST)

001: MFLFGSFTED ETQSLLSKQS SGKKEKPVEK NQLQFGSLNS VTVESNNLLN SSKSPDNSPP SDSQKCNGVK SVSDNSPEVS GTIKENGSIT NISPRSITTS
101: TISVNEVEEK NANSFTLRGE DGPSNKFTKL SLDASEAESL KNLHKIGNGD DSAPKLSDRE PQKAPNGHAV MHVKDILPRG LINSGNLCFL NATMQALLSC
201: SPFVHLLQQL RTRNLPKVGY PTLTAFAEFI AQFDMPSTTK VKKQDTDTFE SGRPFRPVMF EVVLKNFTPD VPNSISGRPR QEDAQEFLSF VMDQMHDELL
301: KLEGHSSSLN GSKSSLVSSV EDDEWETVGP KNKSAVTRTQ SFLPSDLSGI FGGQLRSLVR AKGNRASATV QPYLLLHLDI YPDAVHTIED ALHLFSAPET
401: LEGYRTSLTA KAGVVTARKS VRIVTLPKIM ILHLMRFGYG SQGSIKLHKP VHFPLELVLG RELLVSPSTE GRKYELVATI THHGTEPSKG HYTADAQYPN
501: GRWLRFDDQS VFAIGTNKVL HDQAYVLFYR QM

Best Arabidopsis Sequence Match ( AT4G30890.3 )
(BLAST)

001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V

Arabidopsis Description

UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.