Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
- plastid 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011230.1-P | Field mustard | endoplasmic reticulum, vacuole | 100.0 | 100.0 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 96.1 | 94.97 |
| CDX72275 | Canola | cytosol | 56.61 | 90.27 |
| CDY23262 | Canola | nucleus | 79.32 | 85.56 |
| CDY36465 | Canola | cytosol | 84.58 | 85.01 |
| AT4G30890.2 | Thale cress | cytosol | 74.24 | 79.49 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 44.41 | 70.24 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 43.05 | 59.35 |
| KRH39864 | Soybean | cytosol | 52.88 | 58.65 |
| KRH23933 | Soybean | cytosol | 53.73 | 58.6 |
| VIT_13s0019g01690.t01 | Wine grape | cytosol | 53.05 | 56.6 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 7.12 | 53.85 |
| Solyc01g068240.2.1 | Tomato | cytosol | 47.63 | 52.72 |
| PGSC0003DMT400033175 | Potato | mitochondrion | 14.07 | 49.7 |
| Zm00001d022414_P001 | Maize | cytosol | 46.1 | 49.28 |
| PGSC0003DMT400033182 | Potato | cytosol | 11.53 | 48.23 |
| Os07t0661300-01 | Rice | cytosol, plasma membrane | 39.32 | 47.44 |
| PGSC0003DMT400033184 | Potato | cytosol | 14.41 | 46.45 |
| PGSC0003DMT400033173 | Potato | mitochondrion | 21.69 | 36.06 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 45.25 | 35.7 |
| HORVU2Hr1G022340.2 | Barley | cytosol | 44.75 | 34.78 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 45.25 | 34.63 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 44.92 | 34.37 |
| CDX76934 | Canola | nucleus | 15.76 | 26.27 |
| CDY13770 | Canola | nucleus | 15.76 | 26.12 |
| CDY68864 | Canola | nucleus | 15.93 | 25.27 |
| CDX69375 | Canola | nucleus | 15.76 | 25.07 |
| CDY63898 | Canola | nucleus | 15.76 | 23.37 |
| Zm00001d007096_P007 | Maize | mitochondrion | 44.24 | 22.06 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 16.27 | 19.71 |
| CDY50263 | Canola | cytosol | 8.14 | 17.71 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 17.46 | 15.99 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 17.12 | 15.96 |
| CDX75188 | Canola | vacuole | 16.44 | 15.88 |
| CDX68773 | Canola | nucleus, plasma membrane | 16.44 | 15.8 |
| CDY40119 | Canola | nucleus | 15.59 | 15.75 |
| CDY20330 | Canola | vacuole | 17.12 | 15.71 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 17.12 | 15.51 |
| CDX85744 | Canola | cytosol | 14.92 | 15.12 |
| CDX87681 | Canola | nucleus | 15.59 | 14.6 |
| CDY37145 | Canola | cytosol | 15.59 | 13.81 |
| CDY58499 | Canola | endoplasmic reticulum | 16.78 | 13.73 |
| CDX76553 | Canola | cytosol | 14.75 | 13.55 |
| CDY14564 | Canola | golgi | 17.29 | 13.39 |
| CDY08792 | Canola | vacuole | 16.78 | 13.22 |
| CDX75770 | Canola | mitochondrion, nucleus | 14.58 | 12.95 |
| CDX98449 | Canola | mitochondrion | 15.08 | 12.64 |
| CDX77686 | Canola | endoplasmic reticulum | 16.1 | 12.58 |
| CDX97571 | Canola | mitochondrion | 15.08 | 12.57 |
| CDY32735 | Canola | nucleus | 16.61 | 12.23 |
| CDY02782 | Canola | nucleus | 16.44 | 12.11 |
| CDY11838 | Canola | nucleus, plastid | 16.44 | 11.84 |
| CDX88651 | Canola | nucleus, plastid | 16.44 | 11.77 |
| CDY57464 | Canola | nucleus | 16.78 | 11.67 |
| CDY55010 | Canola | nucleus | 16.61 | 11.53 |
| CDX96790 | Canola | nucleus | 16.1 | 11.38 |
| CDX83925 | Canola | nucleus | 16.1 | 11.22 |
| CDY11021 | Canola | golgi | 18.98 | 11.1 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.44 | 11.07 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.44 | 11.06 |
| CDY03441 | Canola | golgi | 18.47 | 10.76 |
| CDX92643 | Canola | golgi | 18.47 | 10.76 |
| CDY34291 | Canola | golgi | 18.31 | 10.59 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.10 | Gene3D:3.90.70.10 | GO:A0A078GSP3 | UniProt:A0A078GSP3 | EnsemblPlants:CDY28224 | ProteinID:CDY28224 |
| ProteinID:CDY28224.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00039953001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44747 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0002546BBC |
| InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : | : |
Description
BnaA01g06250DBnaA01g06250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSP3]
Coordinates
chrLK032216:-:348146..351292
Molecular Weight (calculated)
64755.6 Da
IEP (calculated)
8.971
GRAVY (calculated)
-0.418
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVATWLLYS SYSLRLNVFV FGSFTEHETR SLLEQQKPIK APQNHKEKSV GSIQFGSFNL VTGSSPVNTN GELKKAQAAD GVVKSRPSSS HKEDSAVSQK
101: RVDAPRPSSS HKEDRSIQSA VSQKRLDASR PSSSDKVAKL PVKHSSGVPE HVVENGTIKE VSERKPLNNG VAVKASLEKL CVSDGESDAL YKATSSKFQA
201: LDSEIFSSDS SPASIPRKNN QMVHTEPAPP LKDFTPRGLI NAGNLCFLNA TLQALLSCSP FVQLLQGIQL QDIPKAESPT LAAFSEFISE LDAPSSSSFR
301: NNVTVVESGR PFTPAMFETV LRNFTPDVLN NMSGRPRQED AQEFLSFIMD QMHDELLKLR DESPRLTGSK SSVLSSASDD DEWETVGPKN KSAVTRTQSF
401: VPSQLSDIFG GELRSVVKAQ GNKDSATVQP YLLLHLDIHP EAVCTIEDAL HLFSAPEDLE GYRASVTGKA GVVSARKSIK IQKLSKIMIL HLMRFSYGNQ
501: GSTKLHKPVH FPLELNLGRY LLASPSNGGL KYELVATITH HGRDPSKGHY TADARRKNNQ WLRFDDASVT AIGPKQVLHD QAYVLFYKQV
101: RVDAPRPSSS HKEDRSIQSA VSQKRLDASR PSSSDKVAKL PVKHSSGVPE HVVENGTIKE VSERKPLNNG VAVKASLEKL CVSDGESDAL YKATSSKFQA
201: LDSEIFSSDS SPASIPRKNN QMVHTEPAPP LKDFTPRGLI NAGNLCFLNA TLQALLSCSP FVQLLQGIQL QDIPKAESPT LAAFSEFISE LDAPSSSSFR
301: NNVTVVESGR PFTPAMFETV LRNFTPDVLN NMSGRPRQED AQEFLSFIMD QMHDELLKLR DESPRLTGSK SSVLSSASDD DEWETVGPKN KSAVTRTQSF
401: VPSQLSDIFG GELRSVVKAQ GNKDSATVQP YLLLHLDIHP EAVCTIEDAL HLFSAPEDLE GYRASVTGKA GVVSARKSIK IQKLSKIMIL HLMRFSYGNQ
501: GSTKLHKPVH FPLELNLGRY LLASPSNGGL KYELVATITH HGRDPSKGHY TADARRKNNQ WLRFDDASVT AIGPKQVLHD QAYVLFYKQV
001: MSEKKVFVFG SFTEHETRSF FEQKPTKDPQ NSKDKCVGSI QFGSLNLAAE NSSVNTNGEL KKGEADGTVK SAGSQERLDA SRPASSDKNN DSDAKLPRKN
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
101: SLRVPEHVVQ NGIIKEISES NKSLNNGVAV KTDPIGLDNL SMSDGESDPV YKASSSKFQA LDNEDFSSDS SSGSIQRKKN LKVPTESVPP VKDFTPRGLI
201: NAGNLCFLNA TLQALLSCSP FVQLLQKIQL QDIPKADSPT LAAFSEFISE LDVPSSSSIR NNVTVVEAGR PFRPAMFEGV LRNFTPDVLN NMSGRPRQED
301: AQEFLSFIMD QMHDELLKLK EQSPKVTASK SSVISSANDD GDEWETVGPK NKSAVTRTQS FVPSELSEIF GGQLKSVVKA KGTKASATVQ PYLLLHLDIH
401: PDGVQGIEDA LHLFSAQEDL EGYRASVTGK TGVVSASKSI KIQKLSKIMI LHLMRFSYGS QGSTKLRKGV KFPLELNLNR SHLVSLSNES LRYELVATIT
501: HHGWDPSKGH YTTDARRKNG QWLRFDDASV TPIGTKLVLH DQAYVLFYKQ V
Arabidopsis Description
UBP24Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.