Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58499 | Canola | endoplasmic reticulum | 86.09 | 90.15 |
| CDY37145 | Canola | cytosol | 63.58 | 72.07 |
| CDX87681 | Canola | nucleus | 59.21 | 70.95 |
| CDX87682 | Canola | cytosol | 3.05 | 69.7 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 54.7 | 56.42 |
| CDX76553 | Canola | cytosol | 36.42 | 42.83 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 19.47 | 41.76 |
| Solyc09g015580.1.1 | Tomato | vacuole | 16.42 | 39.87 |
| Solyc09g015600.1.1 | Tomato | extracellular | 16.03 | 38.78 |
| PGSC0003DMT400093121 | Potato | cytosol | 14.44 | 37.72 |
| Solyc08g048410.1.1 | Tomato | cytosol | 7.95 | 35.93 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 24.64 | 35.43 |
| Solyc09g017980.1.1 | Tomato | extracellular | 9.67 | 35.27 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 9.67 | 33.8 |
| Solyc08g021830.1.1 | Tomato | cytosol | 15.36 | 33.14 |
| Solyc08g005080.1.1 | Tomato | cytosol | 21.19 | 32.99 |
| Solyc09g015610.1.1 | Tomato | cytosol | 5.43 | 32.54 |
| Solyc09g017990.1.1 | Tomato | plastid | 20.4 | 32.29 |
| Solyc02g005600.1.1 | Tomato | vacuole | 20.26 | 31.35 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 9.67 | 31.2 |
| Solyc10g047480.1.1 | Tomato | nucleus | 19.21 | 30.21 |
| PGSC0003DMT400046008 | Potato | cytosol | 21.19 | 30.13 |
| PGSC0003DMT400045160 | Potato | nucleus | 27.81 | 29.49 |
| PGSC0003DMT400093591 | Potato | cytosol | 9.8 | 29.48 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 22.78 | 29.35 |
| PGSC0003DMT400089939 | Potato | cytosol | 14.44 | 29.14 |
| Solyc08g076910.2.1 | Tomato | nucleus | 27.55 | 29.13 |
| Solyc08g023360.1.1 | Tomato | extracellular | 9.67 | 28.74 |
| KRH39541 | Soybean | nucleus | 27.95 | 28.55 |
| CDX76934 | Canola | nucleus | 13.38 | 28.53 |
| KRH74417 | Soybean | nucleus | 27.15 | 28.35 |
| Zm00001d051513_P001 | Maize | nucleus | 22.12 | 28.26 |
| CDY13770 | Canola | nucleus | 13.24 | 28.09 |
| CDX69375 | Canola | nucleus | 13.24 | 26.95 |
| CDY68864 | Canola | nucleus | 13.24 | 26.88 |
| CDY63898 | Canola | nucleus | 13.38 | 25.38 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 23.44 | 23.92 |
| PGSC0003DMT400088084 | Potato | cytosol | 10.6 | 23.81 |
| CDX72275 | Canola | cytosol | 11.52 | 23.51 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 22.78 | 23.43 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 22.91 | 23.41 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 22.78 | 23.27 |
| OQU85579 | Sorghum | nucleus | 22.91 | 23.22 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 22.65 | 23.14 |
| CDX75188 | Canola | vacuole | 17.48 | 21.6 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 13.77 | 21.36 |
| CDX68773 | Canola | nucleus, plasma membrane | 17.35 | 21.34 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 16.03 | 19.12 |
| CDY20330 | Canola | vacuole | 16.16 | 18.97 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 15.89 | 18.63 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 15.89 | 18.43 |
| CDX88651 | Canola | nucleus, plastid | 20.0 | 18.33 |
| CDY11838 | Canola | nucleus, plastid | 19.87 | 18.32 |
| CDY02782 | Canola | nucleus | 19.34 | 18.23 |
| CDY32735 | Canola | nucleus | 19.34 | 18.23 |
| CDY55010 | Canola | nucleus | 20.13 | 17.88 |
| CDY57464 | Canola | nucleus | 19.74 | 17.57 |
| CDX85744 | Canola | cytosol | 13.11 | 17.01 |
| CDY23262 | Canola | nucleus | 12.05 | 16.64 |
| CDY50263 | Canola | cytosol | 5.96 | 16.61 |
| CDX75770 | Canola | mitochondrion, nucleus | 14.57 | 16.57 |
| CDX97571 | Canola | mitochondrion | 15.5 | 16.53 |
| CDX98449 | Canola | mitochondrion | 15.23 | 16.34 |
| CDY40119 | Canola | nucleus | 12.58 | 16.27 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 12.58 | 16.1 |
| CDY36465 | Canola | cytosol | 12.45 | 16.01 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 12.45 | 15.75 |
| CDY08792 | Canola | vacuole | 15.1 | 15.22 |
| CDY14564 | Canola | golgi | 15.1 | 14.96 |
| CDX96790 | Canola | nucleus | 15.36 | 13.89 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.03 | 13.81 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.03 | 13.8 |
| CDX83925 | Canola | nucleus | 15.36 | 13.7 |
| CDY11021 | Canola | golgi | 17.48 | 13.08 |
| CDY03441 | Canola | golgi | 17.09 | 12.73 |
| CDX92643 | Canola | golgi | 17.09 | 12.73 |
| CDY34291 | Canola | golgi | 17.09 | 12.65 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | GO:A0A078CKF7 | EnsemblPlants:CDX77686 | ProteinID:CDX77686 | ProteinID:CDX77686.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:GSBRNA2T00128659001 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | TMHMM:TMhelix |
| UniParc:UPI0004EE22EA | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : |
Description
BnaC07g19400D
Coordinates
chrLK031812:-:914847..918262
Molecular Weight (calculated)
85792.1 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.540
Length
755 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFPPNSKPF LVDSASLLLL GGIFLLSFLY FTKLRSFFLR KFDLGLLLMA ESSPIIETLD EDESSPTAPI RALVSQSLTL SSPIPQIQDQ SPPQIQTLDE
101: SPSSSAEEIE CGDLQMMPTA QISPDSSNRI GSCNRRPPKR HMRYFDYSNL YNHPSRRRYM PNFDYNSDDD LKMELPKPID IFSCSSPKNK PTGVGAGLNN
201: SGNTCFIASV LQCLTHTVPL LASLRSYKYH CPCNCGNESF CVLRSLRYHI EHALRSSGFD IMIDRFRDNL YYFSSDFQIN HQEDAHEFLQ SFLDKLEKCC
301: LDRSRRDNPP SVSSQDVNIV DHVFGGRLVS KLRCCNCNSV SETFETSPGW SLEIEDAEDL SSALESFTCV EKLEDQFTCD DCKEKVSKEK QLKFDQLPLV
401: ATFHLKRFKN NGVYMQKINK DVKFPLELDL LPYMSSNENP EVSTKYHLYA MVEHLGSGTY FGHYSAYVRS APETWHHFDD EKVRRISEEW VLSKSAYMLF
501: YAREGTPCFA SAFEELKTLF EATPINFSPK SCVSDLSYQT VSDSSNACNG SVGVSIPCGN SSDYHCDEAQ DEVFHSAESN SGDEYFAFDS PKADDSEKPF
601: AATFHQEERP LYPDGNRATT DDAYVPVLKI QEQVSSPKRK AAERAIIGEE AFLTKRKMQK RNPFSKRQGK TFQIRREHLQ NKKKREETCI TNPFRIIVAA
701: ASDPKEKNHA VSYLRSRPCS SRSRLLVAAL GVNVKKKKVS NIRRSSLHRN LSERQ
101: SPSSSAEEIE CGDLQMMPTA QISPDSSNRI GSCNRRPPKR HMRYFDYSNL YNHPSRRRYM PNFDYNSDDD LKMELPKPID IFSCSSPKNK PTGVGAGLNN
201: SGNTCFIASV LQCLTHTVPL LASLRSYKYH CPCNCGNESF CVLRSLRYHI EHALRSSGFD IMIDRFRDNL YYFSSDFQIN HQEDAHEFLQ SFLDKLEKCC
301: LDRSRRDNPP SVSSQDVNIV DHVFGGRLVS KLRCCNCNSV SETFETSPGW SLEIEDAEDL SSALESFTCV EKLEDQFTCD DCKEKVSKEK QLKFDQLPLV
401: ATFHLKRFKN NGVYMQKINK DVKFPLELDL LPYMSSNENP EVSTKYHLYA MVEHLGSGTY FGHYSAYVRS APETWHHFDD EKVRRISEEW VLSKSAYMLF
501: YAREGTPCFA SAFEELKTLF EATPINFSPK SCVSDLSYQT VSDSSNACNG SVGVSIPCGN SSDYHCDEAQ DEVFHSAESN SGDEYFAFDS PKADDSEKPF
601: AATFHQEERP LYPDGNRATT DDAYVPVLKI QEQVSSPKRK AAERAIIGEE AFLTKRKMQK RNPFSKRQGK TFQIRREHLQ NKKKREETCI TNPFRIIVAA
701: ASDPKEKNHA VSYLRSRPCS SRSRLLVAAL GVNVKKKKVS NIRRSSLHRN LSERQ
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.