Factsheet for TraesCS6A01G264800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G250100.1	Wheat	nucleus	98.09	97.43
TraesCS6B01G291800.1	Wheat	nucleus	95.64	94.99
HORVU6Hr1G067180.4	Barley	nucleus	92.1	91.47
Zm00001d051513_P001	Maize	nucleus	52.59	65.31
OQU85579	Sorghum	nucleus	64.03	63.09
Zm00001d017686_P002	Maize	mitochondrion, nucleus	59.26	58.78
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	22.89	47.73
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	30.93	38.74
PGSC0003DMT400093121	Potato	cytosol	14.17	35.99
Solyc09g015600.1.1	Tomato	extracellular	14.71	34.62
VIT_02s0012g01340.t01	Wine grape	nucleus	24.39	34.1
Solyc09g015580.1.1	Tomato	vacuole	14.44	34.08
Solyc08g048410.1.1	Tomato	cytosol	7.63	33.53
Solyc10g047480.1.1	Tomato	nucleus	19.89	30.42
Solyc08g005080.1.1	Tomato	cytosol	20.03	30.31
Solyc08g021830.1.1	Tomato	cytosol	14.03	29.43
Solyc09g017990.1.1	Tomato	plastid	19.07	29.35
Solyc09g017980.1.1	Tomato	extracellular	8.17	28.99
PGSC0003DMT400046008	Potato	cytosol	20.84	28.81
Solyc08g048310.1.1	Tomato	extracellular, vacuole	8.45	28.7
PGSC0003DMT400045160	Potato	nucleus	27.66	28.51
CDX87681	Canola	nucleus	24.11	28.1
Solyc08g076910.2.1	Tomato	nucleus	27.11	27.87
KRH74417	Soybean	nucleus	27.38	27.8
KRH39541	Soybean	nucleus	27.52	27.33
PGSC0003DMT400089939	Potato	cytosol	13.9	27.27
Solyc02g005600.1.1	Tomato	vacuole	17.85	26.84
Solyc08g021790.1.1	Tomato	extracellular, vacuole	8.45	26.5
Bra022060.1-P	Field mustard	nucleus	23.98	26.47
PGSC0003DMT400093591	Potato	cytosol	8.99	26.29
CDY37145	Canola	cytosol	23.84	26.28
AT5G46740.1	Thale cress	nucleus, plastid	26.02	26.09
TraesCS4A01G406600.1	Wheat	cytosol	12.81	25.68
Solyc09g015610.1.1	Tomato	cytosol	4.36	25.4
Solyc08g023360.1.1	Tomato	extracellular	8.72	25.2
Bra021031.1-P	Field mustard	nucleus	21.93	25.08
CDX76553	Canola	cytosol	21.93	25.08
AT4G17895.1	Thale cress	nucleus	23.71	25.04
TraesCS2A01G340100.1	Wheat	cytosol	12.53	24.86
Bra025000.1-P	Field mustard	endoplasmic reticulum	23.71	23.87
CDY58499	Canola	endoplasmic reticulum	23.43	23.86
TraesCS2A01G516100.1	Wheat	mitochondrion	11.99	23.78
TraesCS1A01G192900.1	Wheat	cytosol	20.98	22.99
CDX77686	Canola	endoplasmic reticulum	23.43	22.78
TraesCS6A01G203500.1	Wheat	nucleus, plastid	12.53	22.55
PGSC0003DMT400088084	Potato	cytosol	9.26	20.24
TraesCS1A01G329200.2	Wheat	plastid	17.44	19.72
TraesCS7A01G147900.1	Wheat	nucleus	23.84	19.0
TraesCS6A01G357500.1	Wheat	mitochondrion, nucleus	24.52	16.81
TraesCS5A01G246000.3	Wheat	vacuole	17.3	13.2
TraesCS6A01G192600.1	Wheat	plasma membrane	17.44	13.06
TraesCS7A01G282200.4	Wheat	plastid	17.57	13.04
TraesCS2A01G127200.3	Wheat	cytosol	12.53	12.3
TraesCS7A01G498400.1	Wheat	extracellular, golgi, plasma membrane	16.62	11.51

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR44033	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	EnsemblPlantsGene:TraesCS6A01G264800
EnsemblPlants:TraesCS6A01G264800.1	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:+:489220024..489225406

Molecular Weight (calculated)

81621.3 Da

IEP (calculated)

4.892

GRAVY (calculated)

-0.645

Length

734 amino acids

Sequence
(BLAST)

001: MADDDAAASL SQPSPAKGDI SLENGDEKSK QCQPFFSMCQ PLQAVSYSNS WDSVCAPAAT EPCQTSGLDS VDDEYMPSAP SFPDSQQPHS ESISAVVDES
101: NKLCSPPSPT DKECDVEQLQ LESEELLDDS GVLDGEIRQQ SEPLTTDEPS SVDEIKKWGA DTKQHSPPLH NTKHWSSNRA LEPSDNENKP LSLFFSRFRQ
201: PQSVGAGLRN MGNTCFLNAT LQCITHTVPL FKKLRCTDHS TPCSYDEDGF CSFCALKEHI EESIRRSGAV LVPVRFKDNL SKLSSDFRPG QQEDAHEFLR
301: CLLDNLHKCT LDPKSKGKLS SFDEESIVKQ VFGGRLKSLL TCRDCGHCSE TFEPFLDLSL EIDQVDDLVA ALESFTKVEQ VGDDENKLTC ESCKVQVCKD
401: KRLVLDKAPD VIAFQLKRFT TLDNSIEKID KHVAYPSELD LKPFHNNPDK EELMYDLYGV VEHSGLPNYG HYVCTIRSSP STWHLMNDSN VDSITETCAL
501: NQEAYILFYV RQGMFPWFSS LLEEARSGAS PVSVLDNIDA DCLTSSNRSP GDKFEIGETS ECKTSLLAEE PTKRSSVDAS NSTKKKEETT PLRASFQDDV
601: GRRHAPSASE ITNLERPSTP PPCPKRTISV DDFEVFKFEE FDDKDTPLMP KSEHQLKVKK PKAASASKSV KGPSVDKNAT RLMRGMPSAR RKGLLDCMIS
701: QQNVAQEPRR GSRSDPLGKK KRKLDTNSVA VLQY

Best Arabidopsis Sequence Match ( AT5G46740.1 )
(BLAST)

001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL

Arabidopsis Description

UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.