Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G196500.1 | Wheat | cytosol | 64.63 | 76.77 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 22.84 | 35.5 |
| Zm00001d047023_P001 | Maize | nucleus | 27.61 | 29.79 |
| OQU92076 | Sorghum | nucleus | 30.75 | 23.79 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 22.99 | 20.98 |
| PGSC0003DMT400096420 | Potato | mitochondrion | 4.48 | 20.13 |
| TraesCS2A01G516100.1 | Wheat | mitochondrion | 10.75 | 19.46 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 10.45 | 19.13 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 10.0 | 18.11 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 10.3 | 16.91 |
| TraesCS1A01G329200.2 | Wheat | plastid | 15.67 | 16.18 |
| TraesCS7A01G147900.1 | Wheat | nucleus | 18.66 | 13.57 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 18.36 | 11.48 |
| TraesCS6A01G192600.1 | Wheat | plasma membrane | 14.93 | 10.2 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 14.33 | 9.98 |
| TraesCS7A01G282200.4 | Wheat | plastid | 14.63 | 9.91 |
| TraesCS2A01G127200.3 | Wheat | cytosol | 11.04 | 9.89 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 15.22 | 9.62 |
| CDX87682 | Canola | cytosol | 0.45 | 9.09 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44033 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS1A01G192900 |
| EnsemblPlants:TraesCS1A01G192900.1 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1A:+:348689891..348698082
Molecular Weight (calculated)
75233.5 Da
IEP (calculated)
4.732
GRAVY (calculated)
-0.712
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVALPPPPE EKEQQQQQQP AADAIQLQPL ESGPFASLYL LRASRLSGVV PNQARRVKGI ERRPYNEGET HAASPHDRAA TPTGGGVLSS LLASAANAQG
101: AVLRAHHRPP SSLSGGGRGG SGSGGQGKPG EDFTRSNFIS GYELSEPCSK SVFDFDIFHF YLLPDNKLDY VDTSCCSRNL ICGESYYRVC VVHTVPLVLK
201: LQKDDHTDAC PVFSENFRWG RHQDAHEFLR CLLDKLDEAS VPPRSPSSER PSSIVTQVFG GQLKSQLHCP ECNYCSDRLE PFLDLNLEVI PMATVMDALK
301: SFTKIEVFEN YGCDGCKSRV NMEKQLKVEQ APEVLVIQLK RFQNFGSHIT KIEDCMMYQE ELDLNPFMSS PDNKPQKYDL YGVVQHEGAP SNGHYVCYIR
401: SSRTNWFHFN DSKVMKINDV MALESEAYLL FYAKQGSSPW FSTLLKRKNN VSGDTEEGGY SSSSSEDDYY PEGLSWHNDG DKTRSATKEE TDLQLRQIIS
501: MQKEKCGERE IEEKAKAEGD SSIQTTCPES LSWRKEADVK GSDDSPAGPL LGPAGSHSDN IAKGKRTYKA IVQEETTPDE LLQHLKEMVP SIFAKALEGM
601: HTSLALSEAL KREHVVEMHN DDDDKTRSVR KRKWEWDNNL KVVEEEEEEE EEDDDDDDVE EEPYYYVYSD
101: AVLRAHHRPP SSLSGGGRGG SGSGGQGKPG EDFTRSNFIS GYELSEPCSK SVFDFDIFHF YLLPDNKLDY VDTSCCSRNL ICGESYYRVC VVHTVPLVLK
201: LQKDDHTDAC PVFSENFRWG RHQDAHEFLR CLLDKLDEAS VPPRSPSSER PSSIVTQVFG GQLKSQLHCP ECNYCSDRLE PFLDLNLEVI PMATVMDALK
301: SFTKIEVFEN YGCDGCKSRV NMEKQLKVEQ APEVLVIQLK RFQNFGSHIT KIEDCMMYQE ELDLNPFMSS PDNKPQKYDL YGVVQHEGAP SNGHYVCYIR
401: SSRTNWFHFN DSKVMKINDV MALESEAYLL FYAKQGSSPW FSTLLKRKNN VSGDTEEGGY SSSSSEDDYY PEGLSWHNDG DKTRSATKEE TDLQLRQIIS
501: MQKEKCGERE IEEKAKAEGD SSIQTTCPES LSWRKEADVK GSDDSPAGPL LGPAGSHSDN IAKGKRTYKA IVQEETTPDE LLQHLKEMVP SIFAKALEGM
601: HTSLALSEAL KREHVVEMHN DDDDKTRSVR KRKWEWDNNL KVVEEEEEEE EEDDDDDDVE EEPYYYVYSD
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.