Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G192900.1 | Wheat | cytosol | 76.77 | 64.63 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 32.62 | 42.69 |
| Zm00001d047023_P001 | Maize | nucleus | 38.65 | 35.1 |
| TraesCS1D01G196600.1 | Wheat | nucleus | 49.47 | 32.03 |
| OQU92076 | Sorghum | nucleus | 41.67 | 27.14 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 15.25 | 23.5 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 30.67 | 23.41 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 15.07 | 23.22 |
| TraesCS2D01G517600.1 | Wheat | mitochondrion | 14.54 | 22.16 |
| TraesCS6D01G187000.1 | Wheat | nucleus, plastid | 15.25 | 21.08 |
| PGSC0003DMT400096420 | Potato | mitochondrion | 5.14 | 19.46 |
| TraesCS1D01G331300.1 | Wheat | plastid | 20.21 | 17.65 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 21.99 | 13.23 |
| TraesCS6D01G339500.1 | Wheat | nucleus | 22.87 | 12.49 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 18.09 | 11.27 |
| TraesCS6D01G179700.1 | Wheat | plasma membrane | 19.5 | 11.26 |
| TraesCS7D01G280800.4 | Wheat | plastid | 19.15 | 10.89 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 20.39 | 10.8 |
| TraesCS2D01G129600.2 | Wheat | cytosol | 13.3 | 9.73 |
| CDX87682 | Canola | cytosol | 0.53 | 9.09 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF3 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| EnsemblPlantsGene:TraesCS1D01G196500 | EnsemblPlants:TraesCS1D01G196500.1 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:276498985..276504260
Molecular Weight (calculated)
64120.6 Da
IEP (calculated)
4.503
GRAVY (calculated)
-0.723
Length
564 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGDSMPVAL PAPPEEEKEQ QQPAADAIQL QPLESDLGQA VKENREKTSQ GQSSSQDTNF LNHAQRGSFA DEDIKILLKC ARQFNPMLDY VDTSCCSRNL
101: ICGESYYRVG AALSNPEGWT CFVNCILQCV VHTVPLVLKL QKDDHTDACP GASGKFCCYC SLKVHADEVI SLSGAVLYPK KFVEHLKLFS ENCRRGRHQD
201: AHEFLRCLLD KLDEASVPPR SPSSERPSSI VTQVFGGQLK SQLHCPECNY CSDRLEPFLD LNLEVIPMAT VMDALKSFTK IEVFENYGCD GCKSRVNMEK
301: QLKVEQAPEV LVIQLKRFQN FGSHITKIED CMMYQEELDL NPFMSSPDNK PQKYDLYGVV EHEGAPSNGH YVCYIRSSRT NWFHFNDSKV MKINDAMALE
401: SEAYLLFYAK QGSSPWFSTL LKRKNYVSGD TEEGGYSSSS SEDDYYPEGL SWHNDGDKTR SATKEETDLQ LRQIISMQKE KCREREIEEK AKAEGDSSIQ
501: TTCPESLSWR NDDDKTRSAR KRTWEWDNNL EAVEEEEEEE EEEDDDDDVE EDHTTMSART NYLG
101: ICGESYYRVG AALSNPEGWT CFVNCILQCV VHTVPLVLKL QKDDHTDACP GASGKFCCYC SLKVHADEVI SLSGAVLYPK KFVEHLKLFS ENCRRGRHQD
201: AHEFLRCLLD KLDEASVPPR SPSSERPSSI VTQVFGGQLK SQLHCPECNY CSDRLEPFLD LNLEVIPMAT VMDALKSFTK IEVFENYGCD GCKSRVNMEK
301: QLKVEQAPEV LVIQLKRFQN FGSHITKIED CMMYQEELDL NPFMSSPDNK PQKYDLYGVV EHEGAPSNGH YVCYIRSSRT NWFHFNDSKV MKINDAMALE
401: SEAYLLFYAK QGSSPWFSTL LKRKNYVSGD TEEGGYSSSS SEDDYYPEGL SWHNDGDKTR SATKEETDLQ LRQIISMQKE KCREREIEEK AKAEGDSSIQ
501: TTCPESLSWR NDDDKTRSAR KRTWEWDNNL EAVEEEEEEE EEEDDDDDVE EDHTTMSART NYLG
001: MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH CDTYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S
Arabidopsis Description
UBP25Ubiquitin carboxyl-terminal hydrolase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.