Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G196500.1 | Wheat | cytosol | 42.69 | 32.62 |
| TraesCS3B01G442400.1 | Wheat | cytosol | 42.92 | 29.74 |
| Zm00001d047023_P001 | Maize | nucleus | 38.05 | 26.41 |
| TraesCS1B01G207800.1 | Wheat | cytosol, nucleus, plastid | 51.51 | 25.81 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 19.72 | 23.22 |
| TraesCS1A01G192900.1 | Wheat | cytosol | 35.5 | 22.84 |
| TraesCS2B01G544700.1 | Wheat | mitochondrion | 17.4 | 20.27 |
| TraesCS6B01G223900.1 | Wheat | plastid | 19.03 | 19.57 |
| OQU92076 | Sorghum | nucleus | 38.98 | 19.4 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 32.48 | 18.94 |
| TraesCS1B01G342600.2 | Wheat | plastid | 21.58 | 14.4 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 25.52 | 11.71 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 22.27 | 10.48 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 25.75 | 10.38 |
| TraesCS7B01G179000.2 | Wheat | plastid | 23.67 | 10.27 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 23.43 | 10.26 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 23.43 | 9.4 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 16.01 | 8.95 |
| PGSC0003DMT400096420 | Potato | mitochondrion | 2.78 | 8.05 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00973 | PFscan:PS50235 |
| PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS2B01G408400 |
| EnsemblPlants:TraesCS2B01G408400.1 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2B:-:581448865..581451046
Molecular Weight (calculated)
48387.4 Da
IEP (calculated)
6.540
GRAVY (calculated)
-0.486
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHTEEPPLD ADHFVEAVPS SVPQPQLLEE SAPPPPPPPQ PVEKDERPLP AAALPQWSES GPGQDKGDKE TRQDKNLLSL LGAEDKSDSQ ICQEQRFKEN
101: FLNNKMVYAH TQCCSRHLKI EKTDFDVGAS LINPKNWICF VNSVLQCLVH TVPLVSKLLK DPHLHKCPDQ FCGYCSLRNH AFEAIRLSGH VLYPTNFINC
201: LHIISQDFVR GKQQDAHEFL NCFFDKLGKA TISPRSEPRG SIVQEVFGGE LESELSHCPK CNHRPSSKLE PFSDLSLEIN QAGTVVDSLL SYTKAEALED
301: YRCESCNSCM KREKHLKVKK APEVLIMHLK RFQSAGHRTS KITDMVNYQL ELDLAPFMSS PDEQPQNYDL YGVVEHVGSG KDSGHYMSYI RSSDSGHYAG
401: LGNHQGKSSG HKSVSFVLCQ AWFLPVVLYF T
101: FLNNKMVYAH TQCCSRHLKI EKTDFDVGAS LINPKNWICF VNSVLQCLVH TVPLVSKLLK DPHLHKCPDQ FCGYCSLRNH AFEAIRLSGH VLYPTNFINC
201: LHIISQDFVR GKQQDAHEFL NCFFDKLGKA TISPRSEPRG SIVQEVFGGE LESELSHCPK CNHRPSSKLE PFSDLSLEIN QAGTVVDSLL SYTKAEALED
301: YRCESCNSCM KREKHLKVKK APEVLIMHLK RFQSAGHRTS KITDMVNYQL ELDLAPFMSS PDEQPQNYDL YGVVEHVGSG KDSGHYMSYI RSSDSGHYAG
401: LGNHQGKSSG HKSVSFVLCQ AWFLPVVLYF T
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.