Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G196600.1 | Wheat | nucleus | 92.21 | 91.04 |
| TraesCS3B01G442400.1 | Wheat | cytosol | 48.6 | 67.2 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 25.81 | 51.51 |
| Zm00001d047023_P001 | Maize | nucleus | 28.49 | 39.45 |
| OQU92076 | Sorghum | nucleus | 35.58 | 35.33 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 22.21 | 25.85 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 10.93 | 25.68 |
| TraesCS2B01G544700.1 | Wheat | mitochondrion | 9.53 | 22.16 |
| TraesCS6B01G223900.1 | Wheat | plastid | 10.47 | 21.48 |
| PGSC0003DMT400096420 | Potato | mitochondrion | 3.72 | 21.48 |
| TraesCS1B01G342600.2 | Wheat | plastid | 13.14 | 17.49 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 16.51 | 15.12 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 15.81 | 12.72 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 13.26 | 12.45 |
| TraesCS7B01G179000.2 | Wheat | plastid | 13.95 | 12.08 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 13.26 | 11.59 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 14.07 | 11.26 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 9.42 | 10.51 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF3 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 |
| EnsemblPlantsGene:TraesCS1B01G207800 | EnsemblPlants:TraesCS1B01G207800.1 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:+:375812184..375816820
Molecular Weight (calculated)
95603.7 Da
IEP (calculated)
4.659
GRAVY (calculated)
-0.768
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADDGDATT VVAPMPCPEE EREQPSHAAD SPVDPMTAPP PPPLEEEEEE QQQPGERTTT AADAVVAPMP PPPPLSQPEE KQEEQPVPAA ALPQPLESGP
101: ASTEEGHKET SEDKNLFKVP GPADEGHEET SKDKIPFKVP GLADDGHEET SKDKNPLKVP GLADEDDWET CQDRKLLRLL GRADERYHKG IGQGRRPEDD
201: DLEDSCGCSH YRRSRFCYRH EQRDPRYYDH ELHCGGFRRN CYPNWHHSAH LGNGYPDWNG YPGHPHRGYG YPVGRFDQDC MDLYNPRLMD SWDDKLVDTQ
301: CCSWYKLTRG KNDFPVAASL SNPEKWICFL NCILQCVVHT VPLVSKLLKD RHLGPCPTGS DEFCCYCSLR HHASEVIRLS GDVLYPRKFV KRLKSIFRDF
401: EQGQHQDAHE FLRCLLDKLD EVTVAPRSES EEPSSIVKEF FGGQLKSQLN CPKCNHCSDR LESFLDLNLE VNQMDTIMDS LSSYTKIEVV EDFICDGCKS
501: RVNMEKHLKV EQAPEVLVIQ LKRFQNLGSD ISKIHDMVKY QLELDLNPFM SSPDDKPQCY DLYGVVEHWG NTAKGHYVCY IRSSETDWFL FDDDKIVKMT
601: EDRLLEKKAY VLFYVKKGSS PWFSTLLEKK EMLLSDYFEE LAGKGLDEDG APKAGSYSSS GSDSDNDSVE QDVTEHFFGG PAEKNEAGPS SAGLSQGVQG
701: IENGSTLCSV PDKNEVGCSL GVVPSGGTQK PTSLTLSSVE NGDASGLPLL LENKEKSSHG TREANHNGPS SEVLDADSHI GSSQENGRSC NLLQSSSHKH
801: EDYCPENLTL HEEEEDGMAG SCDSPAGSLH ARGSAGTSRL GTVGSNSDRT TNGECNTKFI
101: ASTEEGHKET SEDKNLFKVP GPADEGHEET SKDKIPFKVP GLADDGHEET SKDKNPLKVP GLADEDDWET CQDRKLLRLL GRADERYHKG IGQGRRPEDD
201: DLEDSCGCSH YRRSRFCYRH EQRDPRYYDH ELHCGGFRRN CYPNWHHSAH LGNGYPDWNG YPGHPHRGYG YPVGRFDQDC MDLYNPRLMD SWDDKLVDTQ
301: CCSWYKLTRG KNDFPVAASL SNPEKWICFL NCILQCVVHT VPLVSKLLKD RHLGPCPTGS DEFCCYCSLR HHASEVIRLS GDVLYPRKFV KRLKSIFRDF
401: EQGQHQDAHE FLRCLLDKLD EVTVAPRSES EEPSSIVKEF FGGQLKSQLN CPKCNHCSDR LESFLDLNLE VNQMDTIMDS LSSYTKIEVV EDFICDGCKS
501: RVNMEKHLKV EQAPEVLVIQ LKRFQNLGSD ISKIHDMVKY QLELDLNPFM SSPDDKPQCY DLYGVVEHWG NTAKGHYVCY IRSSETDWFL FDDDKIVKMT
601: EDRLLEKKAY VLFYVKKGSS PWFSTLLEKK EMLLSDYFEE LAGKGLDEDG APKAGSYSSS GSDSDNDSVE QDVTEHFFGG PAEKNEAGPS SAGLSQGVQG
701: IENGSTLCSV PDKNEVGCSL GVVPSGGTQK PTSLTLSSVE NGDASGLPLL LENKEKSSHG TREANHNGPS SEVLDADSHI GSSQENGRSC NLLQSSSHKH
801: EDYCPENLTL HEEEEDGMAG SCDSPAGSLH ARGSAGTSRL GTVGSNSDRT TNGECNTKFI
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.