Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G250100.1 | Wheat | nucleus | 96.35 | 96.35 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 94.99 | 95.64 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 91.34 | 91.34 |
| Zm00001d051513_P001 | Maize | nucleus | 51.96 | 64.97 |
| OQU85579 | Sorghum | nucleus | 63.06 | 62.55 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 58.19 | 58.11 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 22.87 | 48.01 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 30.99 | 39.08 |
| PGSC0003DMT400093121 | Potato | cytosol | 13.94 | 35.64 |
| Solyc09g015600.1.1 | Tomato | extracellular | 14.75 | 34.94 |
| Solyc08g048410.1.1 | Tomato | cytosol | 7.71 | 34.13 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 24.22 | 34.1 |
| Solyc09g015580.1.1 | Tomato | vacuole | 14.34 | 34.08 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 18.94 | 32.48 |
| Solyc08g005080.1.1 | Tomato | cytosol | 19.76 | 30.1 |
| Solyc10g047480.1.1 | Tomato | nucleus | 19.49 | 30.0 |
| Solyc08g021830.1.1 | Tomato | cytosol | 13.8 | 29.14 |
| Solyc09g017980.1.1 | Tomato | extracellular | 8.12 | 28.99 |
| Solyc09g017990.1.1 | Tomato | plastid | 18.54 | 28.72 |
| PGSC0003DMT400045160 | Potato | nucleus | 27.47 | 28.51 |
| PGSC0003DMT400046008 | Potato | cytosol | 20.43 | 28.44 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 8.25 | 28.24 |
| CDX87681 | Canola | nucleus | 23.82 | 27.94 |
| Solyc08g076910.2.1 | Tomato | nucleus | 26.93 | 27.87 |
| KRH74417 | Soybean | nucleus | 27.2 | 27.8 |
| KRH39541 | Soybean | nucleus | 27.33 | 27.33 |
| TraesCS3B01G442400.1 | Wheat | cytosol | 22.87 | 27.17 |
| PGSC0003DMT400089939 | Potato | cytosol | 13.53 | 26.74 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 8.39 | 26.5 |
| Solyc02g005600.1.1 | Tomato | vacuole | 17.46 | 26.43 |
| Bra022060.1-P | Field mustard | nucleus | 23.68 | 26.32 |
| PGSC0003DMT400093591 | Potato | cytosol | 8.93 | 26.29 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 12.99 | 26.23 |
| CDY37145 | Canola | cytosol | 23.55 | 26.13 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 25.58 | 25.82 |
| Solyc08g023360.1.1 | Tomato | extracellular | 8.66 | 25.2 |
| AT4G17895.1 | Thale cress | nucleus | 23.55 | 25.04 |
| Bra021031.1-P | Field mustard | nucleus | 21.52 | 24.77 |
| CDX76553 | Canola | cytosol | 21.52 | 24.77 |
| Solyc09g015610.1.1 | Tomato | cytosol | 4.19 | 24.6 |
| TraesCS2B01G544700.1 | Wheat | mitochondrion | 11.91 | 23.78 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 23.41 | 23.73 |
| CDY58499 | Canola | endoplasmic reticulum | 23.14 | 23.72 |
| CDX77686 | Canola | endoplasmic reticulum | 23.14 | 22.65 |
| TraesCS1B01G207800.1 | Wheat | cytosol, nucleus, plastid | 25.85 | 22.21 |
| TraesCS6B01G223900.1 | Wheat | plastid | 12.31 | 21.72 |
| TraesCS1B01G342600.2 | Wheat | plastid | 17.46 | 19.97 |
| PGSC0003DMT400088084 | Potato | cytosol | 8.93 | 19.64 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 23.27 | 18.32 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 24.22 | 16.74 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 16.51 | 13.32 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 16.91 | 12.7 |
| TraesCS7B01G179000.2 | Wheat | plastid | 16.78 | 12.49 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 12.45 | 11.93 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 16.1 | 11.07 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44033 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS6B01G291800 |
| EnsemblPlants:TraesCS6B01G291800.1 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:+:525105768..525110572
Molecular Weight (calculated)
82485.4 Da
IEP (calculated)
5.332
GRAVY (calculated)
-0.693
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDAAAASL SQPSPAKGDI LRENGDEKSK QCQPFFSMCQ PLQTVSYSNS WDSICAPAAT EPCQTSGLDS VDDDYMPSAS SFPDSQQPHS ESISAIVDES
101: NKLCSPPSPT DKECDVEQLQ LESEELLDDS GVLDGETRQQ LEPLTTHEPS SVDEIKKWGA DTKQHSPPRH NTRHWSSDRA LEPSDNENKP LSLFFSRFRQ
201: PQSVGAGLRN MGNTCFLNAT LQCITHTVPL FKKLRCTDHS TPCSYDEDGF CSFCALKEHI EESVRRSGAV LVPARFKDNL SKLSSDFRPG QQEDAHEFLR
301: CLLDNLHKCT LDPKSKGKPS SFDEESIVKQ VFGGRLKSQL TCRDCGHCSE TFEPFLDLSL EIDQVDDLVA ALESFTKVEQ VGDDENKLTC ESCKVQVCKD
401: KRLVLDKAPD VIAFQLKRFT TLDNSIEKID KHVAYPSELD LKPFHNNPDK EELKYDLYGV VEHSGLPNYG HYVCTIRSSR STWHLMNDSN VDSITETCAL
501: NQEAYILFYV RQGMFPWFSS LLEEARSGAS PVSVLDNIDA DCLTSSNRSP GDKFEIGETS ECKTSLLAEE PTKRYSVDAS SSTNKKEETT PLRISPLRAS
601: FQDDVGRRHA PSPTKITNLE RPSTPPPRPK RPISVDDIEV FKFEEFDDKD TPLMPKSEHQ PKVKKPKAAS ASKSVKGPCV DKNATRLMRG MPSARRKGLL
701: DCMISQQNVV QEPRRGSRSD PLGKKKRKLD TNSVAVLQY
101: NKLCSPPSPT DKECDVEQLQ LESEELLDDS GVLDGETRQQ LEPLTTHEPS SVDEIKKWGA DTKQHSPPRH NTRHWSSDRA LEPSDNENKP LSLFFSRFRQ
201: PQSVGAGLRN MGNTCFLNAT LQCITHTVPL FKKLRCTDHS TPCSYDEDGF CSFCALKEHI EESVRRSGAV LVPARFKDNL SKLSSDFRPG QQEDAHEFLR
301: CLLDNLHKCT LDPKSKGKPS SFDEESIVKQ VFGGRLKSQL TCRDCGHCSE TFEPFLDLSL EIDQVDDLVA ALESFTKVEQ VGDDENKLTC ESCKVQVCKD
401: KRLVLDKAPD VIAFQLKRFT TLDNSIEKID KHVAYPSELD LKPFHNNPDK EELKYDLYGV VEHSGLPNYG HYVCTIRSSR STWHLMNDSN VDSITETCAL
501: NQEAYILFYV RQGMFPWFSS LLEEARSGAS PVSVLDNIDA DCLTSSNRSP GDKFEIGETS ECKTSLLAEE PTKRYSVDAS SSTNKKEETT PLRISPLRAS
601: FQDDVGRRHA PSPTKITNLE RPSTPPPRPK RPISVDDIEV FKFEEFDDKD TPLMPKSEHQ PKVKKPKAAS ASKSVKGPCV DKNATRLMRG MPSARRKGLL
701: DCMISQQNVV QEPRRGSRSD PLGKKKRKLD TNSVAVLQY
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.