Factsheet for Zm00001d051513_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85579	Sorghum	nucleus	87.31	69.26
Zm00001d017686_P002	Maize	mitochondrion, nucleus	84.26	67.3
TraesCS6A01G264800.1	Wheat	nucleus	65.31	52.59
TraesCS6D01G250100.1	Wheat	nucleus	65.65	52.5
TraesCS6B01G291800.1	Wheat	nucleus	64.97	51.96
HORVU6Hr1G067180.4	Barley	nucleus	64.47	51.56
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	27.92	46.88
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	35.7	36.01
Solyc08g048410.1.1	Tomato	cytosol	9.98	35.33
Solyc09g015600.1.1	Tomato	extracellular	18.1	34.29
Solyc09g015580.1.1	Tomato	vacuole	17.77	33.76
VIT_02s0012g01340.t01	Wine grape	nucleus	29.61	33.33
PGSC0003DMT400093121	Potato	cytosol	16.07	32.87
Solyc08g005080.1.1	Tomato	cytosol	24.87	30.31
Solyc09g017980.1.1	Tomato	extracellular	10.49	29.95
Zm00001d000312_P002	Maize	plastid	13.71	28.83
PGSC0003DMT400046008	Potato	cytosol	25.55	28.44
PGSC0003DMT400093591	Potato	cytosol	12.01	28.29
Solyc08g048310.1.1	Tomato	extracellular, vacuole	10.32	28.24
PGSC0003DMT400045160	Potato	nucleus	33.67	27.95
Solyc08g021830.1.1	Tomato	cytosol	16.41	27.71
Solyc10g047480.1.1	Tomato	nucleus	22.5	27.71
KRH74417	Soybean	nucleus	33.84	27.66
Solyc08g076910.2.1	Tomato	nucleus	33.33	27.59
Solyc08g021790.1.1	Tomato	extracellular, vacuole	10.83	27.35
Solyc09g017990.1.1	Tomato	plastid	22.0	27.25
Solyc09g015610.1.1	Tomato	cytosol	5.75	26.98
KRH39541	Soybean	nucleus	33.67	26.93
Zm00001d047023_P001	Maize	nucleus	27.75	26.41
Solyc08g023360.1.1	Tomato	extracellular	11.34	26.38
CDX87681	Canola	nucleus	28.09	26.35
Zm00001d028005_P001	Maize	nucleus	16.24	26.23
Solyc02g005600.1.1	Tomato	vacuole	20.98	25.41
PGSC0003DMT400089939	Potato	cytosol	15.91	25.13
CDY37145	Canola	cytosol	27.92	24.77
Zm00001d003476_P002	Maize	cytosol	15.4	24.73
Zm00001d025570_P003	Maize	nucleus	15.4	24.73
Bra022060.1-P	Field mustard	nucleus	27.75	24.66
AT5G46740.1	Thale cress	nucleus, plastid	30.46	24.59
Bra021031.1-P	Field mustard	nucleus	26.23	24.14
CDX76553	Canola	cytosol	26.23	24.14
AT4G17895.1	Thale cress	nucleus	28.26	24.03
CDY58499	Canola	endoplasmic reticulum	28.43	23.3
Bra025000.1-P	Field mustard	endoplasmic reticulum	28.6	23.18
Zm00001d016918_P001	Maize	plastid	15.91	22.54
CDX77686	Canola	endoplasmic reticulum	28.26	22.12
PGSC0003DMT400088084	Potato	cytosol	10.32	18.15
Zm00001d002086_P001	Maize	plastid	17.26	18.12
Zm00001d010710_P002	Maize	plastid	20.14	17.42
Zm00001d022414_P001	Maize	cytosol	15.57	16.67
Zm00001d045104_P005	Maize	nucleus	25.38	16.61
Zm00001d050489_P001	Maize	nucleus	12.35	15.97
Zm00001d020769_P005	Maize	nucleus	19.12	13.2
Zm00001d036707_P006	Maize	plasma membrane	20.64	12.73
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	20.64	12.58
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	20.3	11.93
Zm00001d000313_P001	Maize	nucleus	6.6	10.54
Zm00001d007096_P007	Maize	mitochondrion	15.57	7.78

Protein Annotations

EntrezGene:103653937	Gene3D:3.90.70.10	MapMan:35.1	ProteinID:AQK54423.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	UniProt:K7UI42
PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR44033	PANTHER:PTHR44033:SF1
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	UniParc:UPI000221D3C9	InterPro:USP_CS	InterPro:USP_dom
EnsemblPlantsGene:Zm00001d051513	EnsemblPlants:Zm00001d051513_P001	EnsemblPlants:Zm00001d051513_T001	SEG:seg	:	:

Description

Putative ubiquitin carboxyl-terminal hydrolase superfamily protein

Coordinates

chr4:+:161032328..161036555

Molecular Weight (calculated)

65491.3 Da

IEP (calculated)

5.154

GRAVY (calculated)

-0.591

Length

591 amino acids

Sequence
(BLAST)

001: MAEQDDAAGQ SPLDSVPIDE TCDAEDMHSP LSFSYRSQPK SVGAGLSNMG NTCFLNATLQ CITHTVPLFL KLRSTDHSTP CSYNKDGFCS FCALKEHVDE
101: SIQRSGSVIA PAKFRDNLRK LSSDFWPGQQ EDAHEFLRCL LDNLHKCTLD PMSKGKGSSF DEESIVNEIF GGQLKSHLSC CECGHSSETF EPFLDLSLEI
201: DQVDHLVDAL QSFTKVEQIG DSENKLTCES CNAQVSKNKQ LTLHRAPDVI AFHLKRFTTL DNSVEKIDKH VVYPLEVDLK PFHSNPDTVG GLKYDLYGVV
301: EHSGLPNYGH YTCTIRSSPS TWYFMNDSKV DSCTDSSALN QEAYILFYVR QGKFPWFSSL LEGKDALQAE NTCGSSPVSV LENIDANCST SFAGGSGSSS
401: GDKLEKNEAS QLEETEKDEM GRYKPSFLPE EPSTRSSLGA SNSNNTIDEN NPPRASLQND VATCLRCVET TNLDKPSTPP RSKRLAFDNE FSVFEFEDFG
501: EEDETLFPNL KLTPKAKKAK AASASKAEKG PCIDQNAVRL MRGMTSTRRK GLMDCIAQQT AKHESSRYPA SDPLDKKKRK PVLQYYVNVK N

Best Arabidopsis Sequence Match ( AT5G46740.1 )
(BLAST)

001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL

Arabidopsis Description

UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.