Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051513_P001 | Maize | nucleus | 69.26 | 87.31 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 80.94 | 81.49 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 63.09 | 64.03 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 63.49 | 64.01 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 62.55 | 63.06 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 61.21 | 61.7 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 22.28 | 47.16 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 29.26 | 37.2 |
| PGSC0003DMT400093121 | Potato | cytosol | 13.96 | 35.99 |
| Solyc08g048410.1.1 | Tomato | cytosol | 7.92 | 35.33 |
| Solyc09g015600.1.1 | Tomato | extracellular | 14.77 | 35.26 |
| Solyc09g015580.1.1 | Tomato | vacuole | 14.36 | 34.41 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 23.22 | 32.95 |
| Solyc08g005080.1.1 | Tomato | cytosol | 21.07 | 32.37 |
| PGSC0003DMT400046008 | Potato | cytosol | 21.75 | 30.51 |
| Solyc09g017980.1.1 | Tomato | extracellular | 8.46 | 30.43 |
| Solyc10g047480.1.1 | Tomato | nucleus | 19.6 | 30.42 |
| Solyc09g017990.1.1 | Tomato | plastid | 19.06 | 29.77 |
| Solyc08g021830.1.1 | Tomato | cytosol | 13.69 | 29.14 |
| PGSC0003DMT400089939 | Potato | cytosol | 14.5 | 28.88 |
| PGSC0003DMT400045160 | Potato | nucleus | 27.52 | 28.79 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 8.32 | 28.7 |
| PGSC0003DMT400093591 | Potato | cytosol | 9.66 | 28.69 |
| Solyc08g076910.2.1 | Tomato | nucleus | 26.85 | 28.01 |
| Solyc09g015610.1.1 | Tomato | cytosol | 4.7 | 27.78 |
| KRH74417 | Soybean | nucleus | 26.58 | 27.39 |
| Solyc02g005600.1.1 | Tomato | vacuole | 17.85 | 27.25 |
| CDX87681 | Canola | nucleus | 22.82 | 26.98 |
| KRH39541 | Soybean | nucleus | 26.71 | 26.93 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 8.46 | 26.92 |
| EER92723 | Sorghum | nucleus | 12.89 | 26.23 |
| CDY37145 | Canola | cytosol | 22.95 | 25.68 |
| AT4G17895.1 | Thale cress | nucleus | 23.89 | 25.61 |
| Solyc08g023360.1.1 | Tomato | extracellular | 8.72 | 25.59 |
| Bra022060.1-P | Field mustard | nucleus | 22.68 | 25.41 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 24.83 | 25.27 |
| EES12269 | Sorghum | cytosol | 12.48 | 25.27 |
| Bra021031.1-P | Field mustard | nucleus | 21.61 | 25.08 |
| CDX76553 | Canola | cytosol | 21.61 | 25.08 |
| CDY58499 | Canola | endoplasmic reticulum | 23.36 | 24.13 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 23.36 | 23.87 |
| EES07024 | Sorghum | mitochondrion | 13.15 | 23.39 |
| CDX77686 | Canola | endoplasmic reticulum | 23.22 | 22.91 |
| OQU92076 | Sorghum | nucleus | 25.91 | 22.29 |
| PGSC0003DMT400088084 | Potato | cytosol | 9.93 | 22.02 |
| EES12962 | Sorghum | plastid | 14.5 | 19.11 |
| KXG22316 | Sorghum | plastid | 16.38 | 18.02 |
| EER89337 | Sorghum | nucleus | 21.61 | 17.56 |
| OQU80649 | Sorghum | nucleus | 16.78 | 15.51 |
| OQU81355 | Sorghum | cytosol, nucleus, plastid | 1.61 | 15.38 |
| OQU89635 | Sorghum | vacuole | 17.32 | 14.14 |
| OQU84698 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 16.78 | 12.94 |
| OQU90420 | Sorghum | mitochondrion | 12.75 | 12.89 |
| KXG20513 | Sorghum | golgi, plasma membrane | 16.78 | 12.81 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | UniProt:A0A194YS02 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | ProteinID:KXG30971.1 | ProteinID:KXG30972.1 |
| EnsemblPlants:OQU85579 | ProteinID:OQU85579 | ProteinID:OQU85579.1 | PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 |
| PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | EnsemblPlantsGene:SORBI_3004G274900 |
| SUPFAM:SSF54001 | UniParc:UPI0003C68B76 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:61830537..61837108
Molecular Weight (calculated)
82438.8 Da
IEP (calculated)
5.358
GRAVY (calculated)
-0.700
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQDGAAGQ SPPDSVPGGA AENGDQNTKQ HQPFFSMCQP LRTVSYSNSW DGVCAPAANE NNHTSGLNSM ADEHTITAST PLGSKQPQSE GISGTSYRED
101: NSCSPHSINK EVSLVQDVME MEQSMDGVDV PHGGTSEQPE PLATEQPDSF DEIDIWGAQD NQQVLPLNSK QWNSNIGETC DAEDMHIPLS VSYRRQPKSV
201: GAGLSNMGNT CFLNATLQCI THTVPLFRKL HSTDHFTPCS YNKDGFCSFC ALKEHADESI RRSGSVIAPT KFRDSLRKLS SDFRPGQQED AHEFLRCLLD
301: NLHKCTLDPK SKGKDSSFDE ESIVKEIFGG QLRSHLSCCE CGHSSETFEP FLDLSLEIDQ VDHLVDALQS FTKVEHIGDS ENKLTCESCN AQVCKNKQLT
401: LHRAPDVIAF HLKRFTTLDN SVEKIDKHVV YPLEVDLKPF YSNPDAAGEL KYDLYGVVEH SGLPNYGHYV CAIRSSPSTW YLMNDSNVDS ITDSSALNQE
501: AYILFYVRQG KFPWFSSLLE GKDALQVENT RGTSPVSVLE NIDANCSNSS GGGSSSSSGD KLEKNEASQL EETEKDEMSR YKTPFLPEKP SKRSPLGASN
601: SNNKIDENKP SRASLQNDAA RCLRSLETTN LDKPSTPRCS KRLALSSDNE SSVFEFEDFD EEVETLHPNM KLQPKVKKAK AASASKAVKG PCIDQNALHL
701: MRGMTSTRRK DLMECIKQQN AKHESRRCPA SDPLDKKKRK VVLQY
101: NSCSPHSINK EVSLVQDVME MEQSMDGVDV PHGGTSEQPE PLATEQPDSF DEIDIWGAQD NQQVLPLNSK QWNSNIGETC DAEDMHIPLS VSYRRQPKSV
201: GAGLSNMGNT CFLNATLQCI THTVPLFRKL HSTDHFTPCS YNKDGFCSFC ALKEHADESI RRSGSVIAPT KFRDSLRKLS SDFRPGQQED AHEFLRCLLD
301: NLHKCTLDPK SKGKDSSFDE ESIVKEIFGG QLRSHLSCCE CGHSSETFEP FLDLSLEIDQ VDHLVDALQS FTKVEHIGDS ENKLTCESCN AQVCKNKQLT
401: LHRAPDVIAF HLKRFTTLDN SVEKIDKHVV YPLEVDLKPF YSNPDAAGEL KYDLYGVVEH SGLPNYGHYV CAIRSSPSTW YLMNDSNVDS ITDSSALNQE
501: AYILFYVRQG KFPWFSSLLE GKDALQVENT RGTSPVSVLE NIDANCSNSS GGGSSSSSGD KLEKNEASQL EETEKDEMSR YKTPFLPEKP SKRSPLGASN
601: SNNKIDENKP SRASLQNDAA RCLRSLETTN LDKPSTPRCS KRLALSSDNE SSVFEFEDFD EEVETLHPNM KLQPKVKKAK AASASKAVKG PCIDQNALHL
701: MRGMTSTRRK DLMECIKQQN AKHESRRCPA SDPLDKKKRK VVLQY
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.