Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74417 | Soybean | nucleus | 84.57 | 86.45 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 32.07 | 45.14 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 20.57 | 43.18 |
| Solyc09g015600.1.1 | Tomato | extracellular | 18.13 | 42.95 |
| Solyc09g015580.1.1 | Tomato | vacuole | 18.0 | 42.77 |
| PGSC0003DMT400093121 | Potato | cytosol | 15.97 | 40.83 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 12.72 | 40.17 |
| Solyc08g048410.1.1 | Tomato | cytosol | 9.07 | 40.12 |
| Solyc08g005080.1.1 | Tomato | cytosol | 25.85 | 39.38 |
| Solyc08g021830.1.1 | Tomato | cytosol | 18.13 | 38.29 |
| PGSC0003DMT400046008 | Potato | cytosol | 26.93 | 37.48 |
| Solyc08g023360.1.1 | Tomato | extracellular | 12.86 | 37.4 |
| PGSC0003DMT400045160 | Potato | nucleus | 35.99 | 37.36 |
| Solyc10g047480.1.1 | Tomato | nucleus | 24.22 | 37.29 |
| Solyc08g076910.2.1 | Tomato | nucleus | 35.99 | 37.25 |
| Solyc09g015610.1.1 | Tomato | cytosol | 6.22 | 36.51 |
| Solyc09g017990.1.1 | Tomato | plastid | 23.55 | 36.48 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 10.55 | 36.11 |
| Solyc09g017980.1.1 | Tomato | extracellular | 10.01 | 35.75 |
| Solyc02g005600.1.1 | Tomato | vacuole | 23.41 | 35.45 |
| PGSC0003DMT400093591 | Potato | cytosol | 11.91 | 35.06 |
| PGSC0003DMT400089939 | Potato | cytosol | 17.32 | 34.22 |
| Zm00001d051513_P001 | Maize | nucleus | 26.93 | 33.67 |
| CDX87681 | Canola | nucleus | 28.15 | 33.02 |
| CDX76553 | Canola | cytosol | 28.01 | 32.24 |
| Bra021031.1-P | Field mustard | nucleus | 28.01 | 32.24 |
| Bra022060.1-P | Field mustard | nucleus | 28.82 | 32.03 |
| CDY37145 | Canola | cytosol | 28.82 | 31.98 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 25.3 | 31.91 |
| AT4G17895.1 | Thale cress | nucleus | 29.36 | 31.22 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 30.18 | 30.46 |
| KRH72298 | Soybean | cytosol, plastid | 20.7 | 30.12 |
| CDY58499 | Canola | endoplasmic reticulum | 28.55 | 29.26 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 28.82 | 29.22 |
| PGSC0003DMT400088084 | Potato | cytosol | 12.99 | 28.57 |
| CDX77686 | Canola | endoplasmic reticulum | 28.55 | 27.95 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 27.33 | 27.52 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 27.47 | 27.47 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 27.33 | 27.33 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 27.2 | 27.2 |
| OQU85579 | Sorghum | nucleus | 26.93 | 26.71 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 26.39 | 26.35 |
| KRG97572 | Soybean | nucleus | 12.45 | 24.93 |
| KRH59329 | Soybean | nucleus | 12.31 | 24.66 |
| KRH43175 | Soybean | nucleus | 12.31 | 24.66 |
| KRH31299 | Soybean | nucleus | 12.18 | 24.39 |
| KRH43852 | Soybean | nucleus | 17.32 | 19.97 |
| KRH13611 | Soybean | nucleus | 16.91 | 19.17 |
| KRH03060 | Soybean | nucleus | 22.46 | 18.38 |
| KRH05289 | Soybean | nucleus | 13.4 | 17.84 |
| KRH15753 | Soybean | nucleus | 12.86 | 17.15 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 16.64 | 16.87 |
| KRH03615 | Soybean | cytosol | 13.26 | 16.55 |
| KRH05330 | Soybean | golgi, plasma membrane | 16.51 | 16.55 |
| KRH39864 | Soybean | cytosol | 11.91 | 16.54 |
| KRH20191 | Soybean | plastid | 13.13 | 16.33 |
| KRH61621 | Soybean | golgi | 16.24 | 16.17 |
| KRH23933 | Soybean | cytosol | 11.77 | 16.08 |
| KRH52289 | Soybean | golgi | 15.97 | 16.08 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 16.91 | 13.48 |
| KRH69660 | Soybean | golgi | 17.05 | 13.43 |
| KRH13569 | Soybean | endoplasmic reticulum, plasma membrane | 17.59 | 13.14 |
| KRH21804 | Soybean | endoplasmic reticulum, plasma membrane | 17.59 | 13.13 |
| KRH72452 | Soybean | golgi, plasma membrane | 17.05 | 12.16 |
| KRH16837 | Soybean | golgi | 17.05 | 12.06 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 14.07 | 11.71 |
| KRH62182 | Soybean | golgi, vacuole | 17.19 | 11.16 |
Protein Annotations
| EntrezGene:100808015 | Gene3D:3.90.70.10 | MapMan:35.1 | EMBL:ACUP02005942 | EnsemblPlantsGene:GLYMA_09G204600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 |
| UniProt:K7LF25 | EnsemblPlants:KRH39541 | ProteinID:KRH39541 | ProteinID:KRH39541.1 | PFAM:PF00443 | ScanProsite:PS00972 |
| ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | UniParc:UPI0002964E38 | InterPro:USP_CS | InterPro:USP_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:42881863..42886163
Molecular Weight (calculated)
81570.2 Da
IEP (calculated)
4.901
GRAVY (calculated)
-0.497
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLSLSSPAM AAEEPLDASP SPNLFSETLS AAELVADLAG YYAQSPTGGG STLPEDSDED TAADDTGVPS SFRQLNHDDS SSLWSSALGS NSRVSSVAPE
101: SWIAAQGNWL LPETKGSDGA EPASEAVPSK MGAGLLNLGN TCFLNAILQC FTHTVPLVQG LRSSTHLIPC SGHKDGFCVI CALRIHVERS LVAPGGTLSP
201: LKFVNNLNYF SSDFRRYQQE DAHEFMQCAL DKLERCFLDL KKSNLNFEDD NLVEKVFGGR FISKLQCSTC GHTSNTFEPL IDMSLEIDNV DSLPSALESF
301: TKVENIDENF RCDNCKEEVS MEKQLMLDQT PSVAALHLKR FKTNGILVEK IDKHIDFPLE LDLQPYTIKV MEDLVAENDV PLKYDLYAIV VHTGLSSTSG
401: HYFCFVRSAP DTWHKLDDSM VTKVSVDSVL SQEAYILFYA RQGTPWFSSI MEEKTQCLDP NIMTTSPKSV LDVGDNMSKS NPILLPNIER GVADVSKEYS
501: EPRFDYYCQE DHNFLEINDT EDATHGFGQL LSGSNQVIFD SNGSKDVDVQ KLFSNRGHND NTLGCGQFPS GSNQESVDLN SSKDVDAQKL FRNRTTLDDS
601: AMLDMGNSYI ENSSLDNNNR QEGGDFRENA GFHSLTPPNS PPDDASDKFH NSRGNLKREN LRSCKRSSNK LTGVSEERRE AVKYLCKNRS RRGLLLKFVT
701: SNKVLDKKRK KMDSSQCKKS TKKSNHTSVS PPVAAGSSQ
101: SWIAAQGNWL LPETKGSDGA EPASEAVPSK MGAGLLNLGN TCFLNAILQC FTHTVPLVQG LRSSTHLIPC SGHKDGFCVI CALRIHVERS LVAPGGTLSP
201: LKFVNNLNYF SSDFRRYQQE DAHEFMQCAL DKLERCFLDL KKSNLNFEDD NLVEKVFGGR FISKLQCSTC GHTSNTFEPL IDMSLEIDNV DSLPSALESF
301: TKVENIDENF RCDNCKEEVS MEKQLMLDQT PSVAALHLKR FKTNGILVEK IDKHIDFPLE LDLQPYTIKV MEDLVAENDV PLKYDLYAIV VHTGLSSTSG
401: HYFCFVRSAP DTWHKLDDSM VTKVSVDSVL SQEAYILFYA RQGTPWFSSI MEEKTQCLDP NIMTTSPKSV LDVGDNMSKS NPILLPNIER GVADVSKEYS
501: EPRFDYYCQE DHNFLEINDT EDATHGFGQL LSGSNQVIFD SNGSKDVDVQ KLFSNRGHND NTLGCGQFPS GSNQESVDLN SSKDVDAQKL FRNRTTLDDS
601: AMLDMGNSYI ENSSLDNNNR QEGGDFRENA GFHSLTPPNS PPDDASDKFH NSRGNLKREN LRSCKRSSNK LTGVSEERRE AVKYLCKNRS RRGLLLKFVT
701: SNKVLDKKRK KMDSSQCKKS TKKSNHTSVS PPVAAGSSQ
001: MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT
Arabidopsis Description
UBP20Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.