CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15753	Soybean	nucleus	93.51	93.68
PGSC0003DMT400038315	Potato	nucleus	52.79	65.4
VIT_04s0008g06860.t01	Wine grape	nucleus	64.32	64.56
Solyc08g068810.2.1	Tomato	cytosol	61.08	61.75
PGSC0003DMT400086994	Potato	cytosol	14.41	60.15
GSMUA_Achr7P05330_001	Banana	cytosol	34.41	59.87
Bra028566.1-P	Field mustard	cytosol	49.19	54.17
AT5G10790.1	Thale cress	cytosol	54.05	53.86
KRH20191	Soybean	plastid	53.33	49.83
CDX85744	Canola	cytosol	52.25	49.83
KRH03615	Soybean	cytosol	52.97	49.66
CDY40119	Canola	nucleus	51.89	49.32
KRG97572	Soybean	nucleus	16.58	24.93
KRH59329	Soybean	nucleus	16.4	24.66
KRH43175	Soybean	nucleus	16.4	24.66
KRH31299	Soybean	nucleus	16.22	24.39
KRH72298	Soybean	cytosol, plastid	20.18	22.05
KRH39864	Soybean	cytosol	16.04	16.73
KRH23933	Soybean	cytosol	16.04	16.45
KRH43852	Soybean	nucleus	17.3	14.98
KRH13611	Soybean	nucleus	17.3	14.72
KRH52289	Soybean	golgi	19.46	14.71
KRH61621	Soybean	golgi	19.1	14.29
KRH74417	Soybean	nucleus	18.2	13.97
KRH15706	Soybean	golgi, plasma membrane, vacuole	18.2	13.85
KRH05330	Soybean	golgi, plasma membrane	18.2	13.7
KRH39541	Soybean	nucleus	17.84	13.4
KRH03060	Soybean	nucleus	20.18	12.4
KRH52893	Soybean	extracellular, golgi, vacuole	19.46	12.16
KRH74502	Soybean	golgi, plasma membrane, vacuole	19.82	11.87
KRH69660	Soybean	golgi	19.82	11.73
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	20.72	11.62
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	20.54	11.53
KRH16837	Soybean	golgi	21.08	11.2
KRH72452	Soybean	golgi, plasma membrane	20.72	11.1
KRH62182	Soybean	golgi, vacuole	21.62	10.54

Protein Annotations

EntrezGene:100789632	MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	EMBL:ACUP02010723
MEROPS:C19.A11	EnsemblPlantsGene:GLYMA_17G218300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464
GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234
GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	UniProt:I1MWZ8	InterPro:IPR001607	InterPro:IPR013083	InterPro:IPR028889
EnsemblPlants:KRH05289	ProteinID:KRH05289	ProteinID:KRH05289.1	PFAM:PF00443	PFAM:PF02148	ScanProsite:PS00972
PFscan:PS50235	PFscan:PS50271	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	SUPFAM:SSF57850	UniParc:UPI000233E0C4	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_UBP	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:36878303..36882246

Molecular Weight (calculated)

62756.2 Da

IEP (calculated)

8.284

GRAVY (calculated)

-0.295

Length

555 amino acids

Sequence
(BLAST)

001: MLLRNPSLYT NPEPCQHLAE YKLKHGFDGY KAIQKLLVIS PIGKASVKKP NTKVPRCGFC NGCEGRFYLC LICSSFSCLD HTLLHPQSET GHAVFVDIER
101: AELFCGVCRD QLYDPDFDQV VMSKHSLGVA SGVTGNESIG QRLIKRRRLA SGVVGLDLQK SKCRVSTKDL REKSCYPVGL RGLNNLGSTC FMNSVLQVLL
201: NAPPFRDYFL SGGHRLEACH HRRTADLMCC LLCDVNAIFS AAYSGDRSPY SPAQFLYSWW QHSANLACYE QQDAHEFFIS MLDAIHEKES KTRNGSKGNG
301: DCQCIAHKVF YGLLRSDVTC MACGFTSTTY DPCVDISLNL DTNVSSTEKG KKLTKQNEDG SMSTLFGCLD LFTRPEKLGS DQKLYCRNCR ERQDSLKQMS
401: IRKLPLVLSL HVKRFEHSFV KKSSRKIDRY LHFPFSLDMS PYLSSSILRA RYGNRIFNFG GDQSDMFSEF EIFAVVTHSG TLESGHYVSF VRLRNQWYRC
501: DDAWITVVDE ATVRASQCYM IFYVQKLQHN KANEDPSHVP NSPGRELFLP IAGFC

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.