CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028566.1-P	Field mustard	cytosol	86.25	99.6
CDY40119	Canola	nucleus	89.86	89.55
AT5G10790.1	Thale cress	cytosol	76.63	80.07
PGSC0003DMT400038315	Potato	nucleus	45.02	58.48
VIT_04s0008g06860.t01	Wine grape	nucleus	54.3	57.14
GSMUA_Achr7P05330_001	Banana	cytosol	31.1	56.74
Solyc08g068810.2.1	Tomato	cytosol	51.03	54.1
PGSC0003DMT400086994	Potato	cytosol	12.2	53.38
KRH05289	Soybean	nucleus	49.83	52.25
KRH15753	Soybean	nucleus	49.66	52.17
CDX76934	Canola	nucleus	14.78	24.29
CDY13770	Canola	nucleus	14.78	24.16
CDY68864	Canola	nucleus	15.12	23.66
CDX69375	Canola	nucleus	14.95	23.45
CDX72275	Canola	cytosol	14.26	22.43
CDY63898	Canola	nucleus	14.95	21.86
CDY68683	Canola	endoplasmic reticulum, vacuole	15.12	18.07
CDX75188	Canola	vacuole	17.7	16.86
CDX68773	Canola	nucleus, plasma membrane	17.7	16.78
CDY50263	Canola	cytosol	7.73	16.61
CDY45587	Canola	endoplasmic reticulum, vacuole	17.7	16.27
CDY23262	Canola	nucleus	15.29	16.27
CDY20330	Canola	vacuole	17.87	16.17
CDY34761	Canola	endoplasmic reticulum, vacuole	17.87	16.15
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	17.87	15.98
CDX87681	Canola	nucleus	16.32	15.08
CDY28224	Canola	endoplasmic reticulum, vacuole	15.12	14.92
CDX68701	Canola	endoplasmic reticulum, extracellular	15.29	14.91
CDY37145	Canola	cytosol	16.67	14.56
CDY36465	Canola	cytosol	14.6	14.48
CDY08792	Canola	vacuole	18.38	14.29
CDY58499	Canola	endoplasmic reticulum	17.35	14.01
CDY14564	Canola	golgi	18.21	13.91
CDX76553	Canola	cytosol	14.95	13.55
CDX75770	Canola	mitochondrion, nucleus	15.29	13.4
CDX97571	Canola	mitochondrion	15.98	13.14
CDX77686	Canola	endoplasmic reticulum	17.01	13.11
CDX98449	Canola	mitochondrion	15.81	13.07
CDY02782	Canola	nucleus	17.53	12.73
CDY32735	Canola	nucleus	17.53	12.73
CDX96790	Canola	nucleus	18.21	12.69
CDX83925	Canola	nucleus	18.38	12.63
CDX88651	Canola	nucleus, plastid	17.87	12.62
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.9	12.54
CDY11838	Canola	nucleus, plastid	17.53	12.45
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.73	12.44
CDY55010	Canola	nucleus	18.04	12.35
CDY57464	Canola	nucleus	17.87	12.26
CDY34291	Canola	golgi	19.76	11.27
CDY11021	Canola	golgi	19.42	11.2
CDY03441	Canola	golgi	19.42	11.15
CDX92643	Canola	golgi	19.24	11.06
CDX87682	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	GO:A0A078DBN6	EnsemblPlants:CDX85744
ProteinID:CDX85744	ProteinID:CDX85744.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:GSBRNA2T00143496001	InterPro:IPR001607
InterPro:IPR013083	InterPro:IPR028889	PFAM:PF00443	PFAM:PF02148	ScanProsite:PS00972	PFscan:PS50235
PFscan:PS50271	PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
SUPFAM:SSF57850	UniParc:UPI0004EDEDD2	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_UBP
SEG:seg	:	:	:	:	:

Description

BnaA02g00690D

Coordinates

chrLK031842:-:1512608..1514951

Molecular Weight (calculated)

66063.2 Da

IEP (calculated)

8.170

GRAVY (calculated)

-0.320

Length

582 amino acids

Sequence
(BLAST)

001: MNCIIITEGD LVSQLFRPSL PFRRSYGKLG QVLGGKHKTW NRILSKIKFV FMKHPDPCNH LSDYKLRHGT DGYKSLQNMF TPLNDGRIKI KLPETTRCTH
101: CSVPHHHKLY ICLICRTLSC SSHLLSHARS NQGHDLAIDV ERSELYCSSC VDQVYDPDFD NLLVSKLGSL SVAVVASDGV GGCGVRSSKK RRLLADSQFL
201: VDRREKWSYP LGLRGLNNLG STCFMNAVLQ ALVHAPPLRN FWLSGQHNRD LCPRRSMGLL CLPCDLDVIF SAMFSGDRTP YSPAQLLYSW WQHSTNLATY
301: EQQDSHEFFI SLLDCIHENE GKSKCLYKDH EECQCITHRA FSGLLRSDVT CTTCGSTSTT YDPFIDISLT LESAKGTKSR NSGEPSVNSP MMPTLSGCLD
401: LFTRSEKLGP DQKLNCRSCG DKRESSKQMS IRRLPPLLCL HVKRFEHSLT RKASRKIDSY LQYPFRLNMS PYLSSSIIGK RFGNRMFAFD GEGEHDGSEF
501: EIFAVVTHSG MLASGHYVTY LRLKGLWYRC DDAWINEVEE EVVRGCECYM LFYAQERVVQ KAHKELSYQV ISMADAFPFV DC

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.