Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024386.1-P | Field mustard | golgi | 98.26 | 95.96 |
| CDY14564 | Canola | golgi | 94.39 | 92.78 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 79.44 | 79.33 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 42.72 | 43.24 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 46.46 | 38.54 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 46.46 | 37.54 |
| KRH69660 | Soybean | golgi | 45.93 | 36.67 |
| GSMUA_Achr10P... | Banana | golgi | 21.63 | 36.0 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 18.02 | 34.97 |
| CDX75188 | Canola | vacuole | 27.77 | 34.04 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 28.7 | 33.97 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 29.11 | 33.85 |
| CDX68773 | Canola | nucleus, plasma membrane | 27.64 | 33.71 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 29.11 | 33.49 |
| CDY20330 | Canola | vacuole | 28.7 | 33.44 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 39.92 | 33.26 |
| Zm00001d050489_P001 | Maize | nucleus | 19.76 | 32.39 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 31.64 | 32.16 |
| GSMUA_Achr10P... | Banana | nucleus | 16.82 | 31.03 |
| Os08t0478500-01 | Rice | plastid | 39.79 | 30.47 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 18.69 | 30.43 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 40.32 | 29.81 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 35.91 | 29.72 |
| OQU80649 | Sorghum | nucleus | 31.91 | 29.65 |
| TraesCS7A01G282200.4 | Wheat | plastid | 38.99 | 29.52 |
| CDX92643 | Canola | golgi | 39.52 | 29.22 |
| CDY03441 | Canola | golgi | 39.52 | 29.22 |
| CDY11021 | Canola | golgi | 39.12 | 29.04 |
| TraesCS7D01G280800.4 | Wheat | plastid | 38.45 | 29.03 |
| TraesCS7B01G179000.2 | Wheat | plastid | 38.45 | 29.0 |
| CDY34291 | Canola | golgi | 39.25 | 28.82 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 35.25 | 28.82 |
| Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 35.65 | 28.77 |
| Zm00001d020769_P005 | Maize | nucleus | 32.84 | 28.74 |
| OQU89635 | Sorghum | vacuole | 34.05 | 27.96 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 35.51 | 27.65 |
| CDY13770 | Canola | nucleus | 13.08 | 27.53 |
| CDY68864 | Canola | nucleus | 13.62 | 27.42 |
| CDX76934 | Canola | nucleus | 12.95 | 27.4 |
| CDX69375 | Canola | nucleus | 13.48 | 27.22 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 35.78 | 26.99 |
| CDX96790 | Canola | nucleus | 29.91 | 26.83 |
| Solyc04g076210.2.1 | Tomato | nucleus | 39.12 | 26.66 |
| CDX83925 | Canola | nucleus | 30.04 | 26.56 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.84 | 26.37 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.71 | 26.23 |
| CDY63898 | Canola | nucleus | 13.48 | 25.38 |
| CDX72275 | Canola | cytosol | 12.02 | 24.32 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 14.02 | 21.56 |
| CDX75770 | Canola | mitochondrion, nucleus | 16.96 | 19.13 |
| CDX85744 | Canola | cytosol | 14.29 | 18.38 |
| CDX98449 | Canola | mitochondrion | 17.22 | 18.32 |
| CDY23262 | Canola | nucleus | 13.35 | 18.28 |
| CDX97571 | Canola | mitochondrion | 17.22 | 18.22 |
| CDY40119 | Canola | nucleus | 14.02 | 17.98 |
| CDX76553 | Canola | cytosol | 14.82 | 17.29 |
| CDX87681 | Canola | nucleus | 14.29 | 16.98 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 13.22 | 16.78 |
| CDY36465 | Canola | cytosol | 13.08 | 16.7 |
| CDY50263 | Canola | cytosol | 6.01 | 16.61 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 13.08 | 16.42 |
| CDY37145 | Canola | cytosol | 14.29 | 16.07 |
| CDY57464 | Canola | nucleus | 17.89 | 15.8 |
| CDY11838 | Canola | nucleus, plastid | 17.22 | 15.75 |
| CDY02782 | Canola | nucleus | 16.82 | 15.73 |
| CDX88651 | Canola | nucleus, plastid | 17.09 | 15.53 |
| CDY55010 | Canola | nucleus | 17.62 | 15.53 |
| CDY58499 | Canola | endoplasmic reticulum | 14.69 | 15.26 |
| CDY32735 | Canola | nucleus | 16.29 | 15.23 |
| CDX77686 | Canola | endoplasmic reticulum | 15.22 | 15.1 |
| CDX87682 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078F6S9 | UniProt:A0A078F6S9 | EnsemblPlants:CDY08792 |
| ProteinID:CDY08792 | ProteinID:CDY08792.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00000733001 | InterPro:IPR002893 |
| InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 |
| PFscan:PS50865 | PANTHER:PTHR45492 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | UniParc:UPI0004EE24EC | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg |
Description
BnaA06g24320DBnaA06g24320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6S9]
Coordinates
chrLK031989:-:450208..453427
Molecular Weight (calculated)
83802.3 Da
IEP (calculated)
8.201
GRAVY (calculated)
-0.484
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPFLLIGFL MLAFLLIRRQ WRSAAVNREE VLRLISLATE ESYLAAEKKE EEEARATVDY YGSSSVPPDV YSCAVCHYPT TTRCSQCKSV RYCSSKCQIL
101: HWRRGHKEEC RPPPLHDYDR EVDQSDDGEE TNIELPSRGT EVNNDGVSVD LACDISTSRS SVQKVQPKSE AVDFTTSLNE KDNFYETKPI SRKKSHNRTE
201: KVESSRKHSK GKSVLFTDAK PQNSRRSVDT VQVSASNHPF SVEHEGEKIA LGHGKTTSEP SSSAPSAALS FSTIPLPSKA ISKPRVSQAS SSSSVLKTSM
301: QKVVQHFRPP KSSKLTQPST SVNEMSFSYE MFVKLYRDRI ELQPFGLVNL GNSCYANVVL QCLAFTRPLI SYLIRGIHSK ACRKKSWCFV CEFEFLILKS
401: RGGESPLSPI KILSRLQKIG KHLGPGKQED AHEFLRWCAV DTMQSVFLKE ADAAGPLAEE TTLVGLTFGG YLHSKIKCMK CLHKSERTEL MMDLTVEIGG
501: DIGSLEEALA QFTAYEVLDG ENRYLCDRCK SYQKAKKKLM ILEGPNILTV VLKRFESDNF GKLSKPIHFP ELLDISPYMS NPNHGDHDPM YSLYAVVVHL
601: DATSYSGHYV CYIKNLHGDW FKIDDSNVFP VPLQTVLLEG AYMLLYARDS PRPVSKNGGG RKSKERRNLS AIPSRHDNNS KKKQEKDSSS SLLPRVDLSS
701: GSLSSMFSSS ETTSSCSTKD SSGFENLSDY LFGGVEQAWN QDPSSQTFY
101: HWRRGHKEEC RPPPLHDYDR EVDQSDDGEE TNIELPSRGT EVNNDGVSVD LACDISTSRS SVQKVQPKSE AVDFTTSLNE KDNFYETKPI SRKKSHNRTE
201: KVESSRKHSK GKSVLFTDAK PQNSRRSVDT VQVSASNHPF SVEHEGEKIA LGHGKTTSEP SSSAPSAALS FSTIPLPSKA ISKPRVSQAS SSSSVLKTSM
301: QKVVQHFRPP KSSKLTQPST SVNEMSFSYE MFVKLYRDRI ELQPFGLVNL GNSCYANVVL QCLAFTRPLI SYLIRGIHSK ACRKKSWCFV CEFEFLILKS
401: RGGESPLSPI KILSRLQKIG KHLGPGKQED AHEFLRWCAV DTMQSVFLKE ADAAGPLAEE TTLVGLTFGG YLHSKIKCMK CLHKSERTEL MMDLTVEIGG
501: DIGSLEEALA QFTAYEVLDG ENRYLCDRCK SYQKAKKKLM ILEGPNILTV VLKRFESDNF GKLSKPIHFP ELLDISPYMS NPNHGDHDPM YSLYAVVVHL
601: DATSYSGHYV CYIKNLHGDW FKIDDSNVFP VPLQTVLLEG AYMLLYARDS PRPVSKNGGG RKSKERRNLS AIPSRHDNNS KKKQEKDSSS SLLPRVDLSS
701: GSLSSMFSSS ETTSSCSTKD SSGFENLSDY LFGGVEQAWN QDPSSQTFY
001: MPVSLESETL GFRCLLIGCM MLVFLLIRRQ WRSASVRREE VIRLIALATE ESYLAEEVRP ATVDYGGDSV SDVYRCAVCL YPTTTRCSQC KSVRYCSSKC
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD
Arabidopsis Description
UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.