Factsheet for Bra024386.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08792	Canola	vacuole	95.96	98.26
CDY14564	Canola	golgi	94.26	94.88
AT5G65450.2	Thale cress	endoplasmic reticulum, golgi, mitochondrion, nucleus	77.71	79.47
VIT_00s0407g00030.t01	Wine grape	golgi, vacuole	41.59	43.11
VIT_00s0199g00030.t01	Wine grape	vacuole	45.24	38.43
KRH74502	Soybean	golgi, plasma membrane, vacuole	45.63	37.76
KRH69660	Soybean	golgi	45.11	36.89
GSMUA_Achr10P...	Banana	golgi	21.25	36.22
Bra007837.1-P	Field mustard	nucleus	23.86	35.88
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	17.86	35.49
Bra011290.1-P	Field mustard	vacuole	27.77	34.8
Bra032080.1-P	Field mustard	endoplasmic reticulum, vacuole	28.29	34.39
GSMUA_Achr5P22990_001	Banana	vacuole	39.37	33.59
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	31.29	32.56
Zm00001d050489_P001	Maize	nucleus	19.3	32.39
GSMUA_Achr10P...	Banana	nucleus	16.43	31.03
GSMUA_Achr7P19010_001	Banana	nucleus	18.38	30.65
Os08t0478500-01	Rice	plastid	38.98	30.57
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	35.46	30.06
GSMUA_AchrUn_...	Banana	golgi, vacuole	39.5	29.91
TraesCS7A01G282200.4	Wheat	plastid	38.46	29.83
OQU80649	Sorghum	nucleus	31.29	29.78
TraesCS7D01G280800.4	Wheat	plastid	37.94	29.33
TraesCS7B01G179000.2	Wheat	plastid	37.94	29.31
Bra019219.1-P	Field mustard	golgi	38.59	29.25
TraesCS5B01G243400.1	Wheat	vacuole	34.81	29.15
Bra013814.1-P	Field mustard	golgi	38.59	29.02
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	35.07	28.99
Zm00001d020769_P005	Maize	nucleus	32.2	28.86
OQU89635	Sorghum	vacuole	33.38	28.07
TraesCS5A01G246000.3	Wheat	vacuole	35.07	27.96
Bra038533.1-P	Field mustard	nucleus	12.78	27.61
Bra010647.1-P	Field mustard	nucleus	13.3	27.42
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	35.07	27.09
Solyc04g076210.2.1	Tomato	nucleus	37.94	26.48
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.25	26.45
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	30.12	25.9
Bra011823.1-P	Field mustard	nucleus	13.04	22.68
Bra024037.1-P	Field mustard	cytosol	11.6	22.25
Bra028566.1-P	Field mustard	cytosol	13.56	20.63
Bra027341.1-P	Field mustard	mitochondrion	16.95	18.92
Bra010268.1-P	Field mustard	cytosol	13.17	17.75
Bra021031.1-P	Field mustard	nucleus	14.47	17.29
Bra011230.1-P	Field mustard	endoplasmic reticulum, vacuole	13.17	17.12
Bra022060.1-P	Field mustard	nucleus	14.08	16.24
Bra006790.1-P	Field mustard	nucleus, plastid	16.69	15.4
Bra025000.1-P	Field mustard	endoplasmic reticulum	14.34	15.09
Bra020400.1-P	Field mustard	nucleus	16.3	15.01
Bra002683.1-P	Field mustard	nucleus	17.34	13.54

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra024386	EnsemblPlants:Bra024386.1	EnsemblPlants:Bra024386.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787	GO:GO:0019538
GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893	InterPro:IPR028889	UniProt:M4E6I2	PFAM:PF00443
PFAM:PF01753	ScanProsite:PS00972	ScanProsite:PS01360	PFscan:PS50235	PFscan:PS50865	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI000253F50E	InterPro:USP_CS
InterPro:USP_dom	InterPro:Znf_MYND	SEG:seg	:	:	:

Description

AT5G65450 (E=7e-249) UBP17 | UBP17 (UBIQUITIN-SPECIFIC PROTEASE 17); cysteine-type endopeptidase/ ubiquitin thiolesterase/ zinc ion binding

Coordinates

chrA06:+:15417774..15420976

Molecular Weight (calculated)

85557.5 Da

IEP (calculated)

8.253

GRAVY (calculated)

-0.487

Length

767 amino acids

Sequence
(BLAST)

001: MSPFLLIGCL MLAFLLIRRQ WRSAAVKREE VLRLISLATE ESYLAAEKKE EEARATVDYY GSSSVPPDVY SCAVCHYPTT TRCAQCKSVR YCSSKCQILH
101: WRRGHKEECR PPPLHDFDRE EDKSVKSDDG EETNIELPSR GTEFESSAAD DGLTGIETNE RVNNDGVSVD LACDISTSRS SVQKVQPKSE AVDFTTSLNE
201: KDNFYETKPI SRKKSHNRTE KVESSRKHSK GKSVLFTDAK PQNSRRSVDT VQVSASNHPF SVEHEGEKIA LGHGKTTSEP SSSAPSAALS FSTIPLPSKA
301: ISKPRVSQAS SSSSVLKTSM QKVVQHFRPP KSSKLTQPST SVNEMSFSYE MFVKLYRDRI ELQPFGLVNL GNSCYANVVL QCLAFTRPLI SYLIRGIHSK
401: ACRKKSWCFV CEFEFLILKS RGGESPLSPI KILSRLQKIG KHLGPGKQED AHEFLRCAVD TMQSVFLKEA DAAGPLAEET TLVGLTFGGY LHSKIKCMKC
501: LHKSERTELM MDLTVEIGGD IGSLEEALAQ FTAYEVLDGE NRYLCDRCKS YQKAKKKLMI LEGPNILTVV LKRFESDNFG KLSKPIHFPE LLDISPYMSN
601: PNHGDHHPMY SLYAVVVHLD ATSYSGHYVC YIKNLHGDWF KIDDSNVFPV PLQTVLLEGA YMLLYARDSP RPVSKNGGGR KSKERRNLSA IPSRHDNNSK
701: KKQEKDSSSS LLPRVDLSSG SLSSMFSSSE TTSSCSTKDS SGFENLSDYL FGGVEQVWNQ DPSSQRV

Best Arabidopsis Sequence Match ( AT5G65450.2 )
(BLAST)

001: MPVSLESETL GFRCLLIGCM MLVFLLIRRQ WRSASVRREE VIRLIALATE ESYLAEEVRP ATVDYGGDSV SDVYRCAVCL YPTTTRCSQC KSVRYCSSKC
101: QILHWRRGHK EECRSPDYDE EKEEYVQSDY DAKESNVDFP SRGTAYESSS NVSVDVACDM STSRPSIHKV QPRSEAVDFT TSLNIKDNLY ETRPLSRKKS
201: RNRTDKVESA SNYSKGKTDA KLRKLGNQNS RRSGDSANMS ISDQFLSVGF EEEMNALKHE RITSEPSSAS AAMSSSSTLL LPSKANSKPK VSQASSSGLK
301: TSVQKVVQHF RPPQSSKKSQ PSSSIDEMSF SYELFVKLYC DRVELQPFGL VNLGNSCYAN AVLQCLAFTR PLISYLIRGL HSKTCRKKSW CFVCEFEHLI
401: LKARGGESPL SPIKILSKLQ KIGKHLGPGK EEDAHEFLRC AVDTMQSVFL KEAPAAGPFA EETTLVGLTF GGYLHSKIKC MACLHKSERP ELMMDLTVEI
501: DGDIGSLEEA LAQFTAYEVL DGENRYFCGR CKSYQKAKKK LMILEGPNIL TVVLKRFQSD NFGKLSKPIH FPELLDISPY MSDPNHGDHP VYSLYAVVVH
601: LDAMSTLFSG HYVCYIKTLD GDWFKIDDSN VFPVQLETVL LEGAYMLLYA RDSPRPVSKN GGRKSKQRRN LAAIPSRKGN KKQRDGDNNS LLPRVDWSSG
701: SLSSMFSSSD TTSSCSTKDS SGIENLSDYL FGGVEPVWKW DRHNKSQTFD

Arabidopsis Description

UBP17ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.