Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P19010_001 | Banana | nucleus | 72.41 | 63.91 |
| Zm00001d050489_P001 | Maize | nucleus | 50.25 | 44.64 |
| OQU80649 | Sorghum | nucleus | 49.75 | 25.06 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 51.23 | 23.14 |
| HORVU5Hr1G069620.20 | Barley | cytosol, nucleus | 41.87 | 23.07 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 25.37 | 22.06 |
| Os09t0464400-00 | Rice | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 49.26 | 21.55 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 51.48 | 20.63 |
| Os08t0478500-01 | Rice | plastid | 48.28 | 20.04 |
| Zm00001d020769_P005 | Maize | nucleus | 41.63 | 19.74 |
| HORVU7Hr1G064340.3 | Barley | endoplasmic reticulum | 47.04 | 19.23 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 43.35 | 19.21 |
| TraesCS7A01G282200.4 | Wheat | plastid | 46.55 | 19.11 |
| TraesCS7B01G179000.2 | Wheat | plastid | 46.55 | 19.03 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 42.12 | 18.94 |
| TraesCS7D01G280800.4 | Wheat | plastid | 46.06 | 18.85 |
| TraesCS5D01G252600.2 | Wheat | endoplasmic reticulum, vacuole | 41.87 | 18.78 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 14.04 | 18.69 |
| OQU89635 | Sorghum | vacuole | 40.89 | 18.2 |
| TraesCS5A01G246000.3 | Wheat | vacuole | 42.36 | 17.88 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 32.27 | 17.47 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 31.53 | 17.3 |
| CDY08792 | Canola | vacuole | 31.03 | 16.82 |
| GSMUA_Achr10P... | Banana | cytosol | 14.29 | 16.81 |
| CDY14564 | Canola | golgi | 31.03 | 16.54 |
| KRH69660 | Soybean | golgi | 38.18 | 16.52 |
| Bra024386.1-P | Field mustard | golgi | 31.03 | 16.43 |
| KRH74502 | Soybean | golgi, plasma membrane, vacuole | 37.44 | 16.4 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 14.04 | 16.19 |
| KRH72452 | Soybean | golgi, plasma membrane | 38.92 | 15.25 |
| GSMUA_Achr10P... | Banana | nucleus | 14.04 | 15.24 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 13.55 | 15.03 |
| KRH16837 | Soybean | golgi | 38.42 | 14.93 |
| Solyc04g076210.2.1 | Tomato | nucleus | 40.15 | 14.83 |
| CDY11021 | Canola | golgi | 36.7 | 14.77 |
| KRH62182 | Soybean | golgi, vacuole | 41.38 | 14.76 |
| GSMUA_Achr7P05330_001 | Banana | cytosol | 11.58 | 14.73 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 30.05 | 14.56 |
| Bra019219.1-P | Field mustard | golgi | 36.21 | 14.53 |
| CDY03441 | Canola | golgi | 36.21 | 14.51 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 43.35 | 14.37 |
| CDX92643 | Canola | golgi | 35.71 | 14.31 |
| CDY34291 | Canola | golgi | 35.96 | 14.31 |
| Bra013814.1-P | Field mustard | golgi | 35.96 | 14.31 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 35.47 | 14.29 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 30.79 | 13.5 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 12.07 | 13.14 |
| GSMUA_Achr9P10330_001 | Banana | mitochondrion | 19.7 | 12.84 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 18.97 | 12.83 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 29.56 | 12.75 |
| KRH52893 | Soybean | extracellular, golgi, vacuole | 27.59 | 12.61 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 17.24 | 11.95 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 12.32 | 11.68 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 30.79 | 11.05 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 20.69 | 9.89 |
| GSMUA_Achr7P17050_001 | Banana | plastid | 11.58 | 9.0 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 19.21 | 8.07 |
| GSMUA_Achr7P19170_001 | Banana | cytosol | 1.97 | 5.97 |
| GSMUA_Achr10P... | Banana | golgi | 0.49 | 0.44 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 |
| EnsemblPlantsGene:GSMUA_Achr10G30220_001 | EnsemblPlants:GSMUA_Achr10P30220_001 | EnsemblPlants:GSMUA_Achr10T30220_001 | InterPro:IPR028889 | UniProt:M0RMP6 | PFAM:PF00443 |
| PFscan:PS50235 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI000294E17E |
| InterPro:USP_dom | SEG:seg | : | : | : | : |
Description
Putative ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G30220_001]
Coordinates
chr10:-:32460401..32463393
Molecular Weight (calculated)
46127.1 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.770
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIRCSRCKS KSERCERMMD LTVEIDGNIS TLDEALLRFT SPEILDGENK YECGRCKSYE RAKKRLTILE APNVLTIVLK RFQSGMFGKL NKPVRFHEYL
101: DLAPYMSGDD KSPVYRLYAA IVHIDVKNAS FSGHYVCYVK DTQGKWYKIN DSKVNPVELE EVLSKGAYML LYARCSPRAP TSVRKALAHE LEQARKTRSK
201: LKPGGPSVAQ QGTCFYPQRT MSDHSNFRSS DLFNERLRPL RNDSSSDSSS LFDEGSSCST ESTRDSTSTE EYWERMSGES DSVNLNSPLR VLEESDGFTR
301: SPLSSRHSSK AVLSGSMPDH HRGDDSECIA NSSGREINQV EAERPGCVKH HSDESRSFLY ADKNEHCRNL TEQCRAIETG WINPNEVKSG ILLRRPSRER
401: TARTFY
101: DLAPYMSGDD KSPVYRLYAA IVHIDVKNAS FSGHYVCYVK DTQGKWYKIN DSKVNPVELE EVLSKGAYML LYARCSPRAP TSVRKALAHE LEQARKTRSK
201: LKPGGPSVAQ QGTCFYPQRT MSDHSNFRSS DLFNERLRPL RNDSSSDSSS LFDEGSSCST ESTRDSTSTE EYWERMSGES DSVNLNSPLR VLEESDGFTR
301: SPLSSRHSSK AVLSGSMPDH HRGDDSECIA NSSGREINQV EAERPGCVKH HSDESRSFLY ADKNEHCRNL TEQCRAIETG WINPNEVKSG ILLRRPSRER
401: TARTFY
001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKVSSL MLFPYEEFLK FFQCEVFDLS PRGLVNCGNS CYANAVLQSL TCTKPLVAYL LRRSHSRSCS GKDWCLMCEL EQHVMMLRES
501: GGPLSASRIL SHMRSINCQI GDGSQEDAHE FLRLLVASMQ SICLERLGGE TKVDPRLQET TLVQHMFGGR LRSKVKCLRC DHESERYENI MDLTLEIYGW
601: VESLQDALTQ FTRPEDLDGE NMYRCSRCAG YVRARKELSI HEAPNILTIV LKRFQEGRYG KINKCISFPE MLDMIPFMTR TGDVPPLYML YAVIVHLDTL
701: NASFSGHYIS YVKDLRGNWY RIDDSEIHPV PMTQVMSEGA YMLFYMRSYP RPQRGEHNGK APVHHSQPRN EMKEQRKPVN RFKPRADHKN TESSSSEWSL
801: FTSSDEASFT TESTRDSFST IDYTDVCHVV DSSSPFAIFN NVYHNVEPSP HNTVACRMFS GTKPETRYFV EQETNHNNTV VLDATPSLYP IPAPYPPHDY
901: YDQSMYVNYE TNPEFNNGQD QDRTYSYW
Arabidopsis Description
UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.