Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P05090_001 | Banana | vacuole | 31.12 | 75.37 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 18.39 | 59.77 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.61 | 47.55 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 26.53 | 47.54 |
| CDY20330 | Canola | vacuole | 26.79 | 47.12 |
| Bra011290.1-P | Field mustard | vacuole | 25.38 | 46.9 |
| KRH05330 | Soybean | golgi, plasma membrane | 30.5 | 46.81 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 26.08 | 46.75 |
| CDX68773 | Canola | nucleus, plasma membrane | 25.38 | 46.74 |
| CDX75188 | Canola | vacuole | 25.2 | 46.64 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 29.97 | 46.5 |
| KRH61621 | Soybean | golgi | 30.42 | 46.36 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 26.17 | 45.96 |
| KRH52289 | Soybean | golgi | 29.8 | 45.91 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.35 | 45.78 |
| Bra007837.1-P | Field mustard | nucleus | 20.6 | 45.69 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 26.53 | 44.64 |
| Solyc08g069050.2.1 | Tomato | extracellular | 30.24 | 44.02 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 22.99 | 41.8 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 30.5 | 39.93 |
| Zm00001d036707_P006 | Maize | plasma membrane | 31.12 | 36.74 |
| KXG20513 | Sorghum | golgi, plasma membrane | 31.21 | 36.17 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 28.21 | 33.79 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 30.5 | 32.39 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 30.33 | 32.36 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 30.59 | 32.19 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 29.35 | 31.59 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 12.64 | 31.09 |
| GSMUA_Achr10P... | Banana | nucleus | 11.05 | 30.79 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 9.2 | 29.55 |
| GSMUA_Achr10P... | Banana | cytosol | 8.31 | 27.25 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 21.57 | 27.14 |
| GSMUA_Achr7P05330_001 | Banana | cytosol | 7.43 | 26.33 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 8.66 | 26.27 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 19.36 | 26.13 |
| GSMUA_Achr7P19160_001 | Banana | mitochondrion | 6.98 | 25.9 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 8.31 | 25.68 |
| GSMUA_Achr10P... | Banana | nucleus | 8.4 | 25.4 |
| GSMUA_Achr10P... | Banana | golgi | 9.9 | 24.89 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 21.49 | 23.99 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 8.13 | 23.83 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 12.38 | 23.33 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 19.36 | 23.27 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 8.66 | 22.9 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 18.13 | 22.14 |
| GSMUA_Achr7P19170_001 | Banana | cytosol | 2.48 | 20.9 |
| GSMUA_Achr9P10330_001 | Banana | mitochondrion | 11.49 | 20.87 |
| GSMUA_Achr7P17050_001 | Banana | plastid | 9.55 | 20.69 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 10.26 | 19.8 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 13.7 | 16.05 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 11.23 | 14.96 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.40.30.10 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0019725 | GO:GO:0036459 | GO:GO:0045454 | EnsemblPlantsGene:GSMUA_Achr1G10260_001 | EnsemblPlants:GSMUA_Achr1P10260_001 | EnsemblPlants:GSMUA_Achr1T10260_001 |
| InterPro:IPR013766 | InterPro:IPR028889 | UniProt:M0RYN5 | PFAM:PF00085 | PFAM:PF00443 | ScanProsite:PS00972 |
| PFscan:PS50235 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF52833 | SUPFAM:SSF54001 |
| TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000295ED5D | InterPro:USP_CS | InterPro:USP_dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_69.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G10260_001]
Coordinates
chr1:-:7734650..7753943
Molecular Weight (calculated)
125883.0 Da
IEP (calculated)
5.893
GRAVY (calculated)
-0.427
Length
1131 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLGAALPALD LSAVLQFAFA LLLTLSGALL VVKRAASRYF VVDASFEAGS SGYEPRRSMS IGNGDAGGEG AAPAGGACAT CGKPGSKKCS GCKRVRYWCK
0101: ANLVFLYFLK LSINFVTTFI RRIIVLLVKI LPVDNVSPGN SSCRRRKSSG FGSISLVPAR GTCNILQEPK KILFPYNEFV KLFNWDNPGF PPCGLVNCGN
0201: SCFANVVLQC LACTRPLVAY LLERGHIREC KKQNDWCFLC ELQLHIKRAS ESRHPFSPIN ILSRLPNIGG NLGYGRQEDA HEFMRFAIDT MQSVCLDEFG
0301: GEKALDPSTQ DTTLIQHIFG GHLQSQVTCT QCNTISNRYE NMMDLTVEIL GDAESLEECL DQFTMKEWLD GDNKYKCDGC NDYVKACKRL TVHQAPNILT
0401: IALKRFQSGR FGKLNKRVTF PENLNLTPYM SGSSDGTDLY TLYAVVVHVD MLNASFFGHY ICYTKDYQGR WYKIDDCKVT NVEVEDVLSE GAYMLLYSRT
0501: SARKEPFVKH VQSQNTKQLV ESAPKLSSPI GVSCLGSDID NQSSPPELSM FRDTRNKRKL TDDVDPAKVT EVDVMVLNTP LVEKPASVHK SLGDLDFCNS
0601: SSSSATAKSL EIESIGLFSP MPDYSSGESM QLDNHPENSE NKVDVEKCQK PCASYDASHI VEDGEPTREP STMQINDDMI IEPCSTTPIT TASVVSEPSD
0701: YSFAESDRPV ETYSQFDSSL EVNRLDGASV DSEGSMALLS SQENRSSGKS KAVFSRGFLD KPARKKTLDS TEEKQNHKHP IVDVNKQNGH SNGHCNIGLA
0801: ESTETGENII SGDMPFVTRS FLQKSYAKSS DMKREPKKSE HQCRVNCNGS AEYACSSADE SIEFRSAAPC CNGASFMQID NDKFPDSASV KREREREREP
0901: STIPSYDPRS RELGIELDSF MDESHAKQIL EQQVLTVARA VEDKIDGEIA ALDRLDLDDF EALRERRLQQ LKKMAEKRSR WLSLGHGEYT EIPEKEFFVA
1001: VKASDRVVCH FYRENWPCKV MDKHLSILAK QHIETRFLKI HAEKSPFLTE KLRIIVLPTL ALVKNAKVED YVVGFDELGG TDDFSTEQLE ERLAKSQVIS
1101: FEGEASSYPT KSNKTKRSVH QSETADSSDS D
0101: ANLVFLYFLK LSINFVTTFI RRIIVLLVKI LPVDNVSPGN SSCRRRKSSG FGSISLVPAR GTCNILQEPK KILFPYNEFV KLFNWDNPGF PPCGLVNCGN
0201: SCFANVVLQC LACTRPLVAY LLERGHIREC KKQNDWCFLC ELQLHIKRAS ESRHPFSPIN ILSRLPNIGG NLGYGRQEDA HEFMRFAIDT MQSVCLDEFG
0301: GEKALDPSTQ DTTLIQHIFG GHLQSQVTCT QCNTISNRYE NMMDLTVEIL GDAESLEECL DQFTMKEWLD GDNKYKCDGC NDYVKACKRL TVHQAPNILT
0401: IALKRFQSGR FGKLNKRVTF PENLNLTPYM SGSSDGTDLY TLYAVVVHVD MLNASFFGHY ICYTKDYQGR WYKIDDCKVT NVEVEDVLSE GAYMLLYSRT
0501: SARKEPFVKH VQSQNTKQLV ESAPKLSSPI GVSCLGSDID NQSSPPELSM FRDTRNKRKL TDDVDPAKVT EVDVMVLNTP LVEKPASVHK SLGDLDFCNS
0601: SSSSATAKSL EIESIGLFSP MPDYSSGESM QLDNHPENSE NKVDVEKCQK PCASYDASHI VEDGEPTREP STMQINDDMI IEPCSTTPIT TASVVSEPSD
0701: YSFAESDRPV ETYSQFDSSL EVNRLDGASV DSEGSMALLS SQENRSSGKS KAVFSRGFLD KPARKKTLDS TEEKQNHKHP IVDVNKQNGH SNGHCNIGLA
0801: ESTETGENII SGDMPFVTRS FLQKSYAKSS DMKREPKKSE HQCRVNCNGS AEYACSSADE SIEFRSAAPC CNGASFMQID NDKFPDSASV KREREREREP
0901: STIPSYDPRS RELGIELDSF MDESHAKQIL EQQVLTVARA VEDKIDGEIA ALDRLDLDDF EALRERRLQQ LKKMAEKRSR WLSLGHGEYT EIPEKEFFVA
1001: VKASDRVVCH FYRENWPCKV MDKHLSILAK QHIETRFLKI HAEKSPFLTE KLRIIVLPTL ALVKNAKVED YVVGFDELGG TDDFSTEQLE ERLAKSQVIS
1101: FEGEASSYPT KSNKTKRSVH QSETADSSDS D
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.