Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 4
- extracellular 4
- vacuole 4
- plasma membrane 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 78.12 | 82.94 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 77.83 | 82.88 |
| CDY20330 | Canola | vacuole | 78.72 | 82.27 |
| Bra007837.1-P | Field mustard | nucleus | 62.2 | 81.96 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 78.27 | 81.68 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 77.98 | 80.49 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 65.48 | 69.73 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 33.18 | 64.08 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 42.11 | 60.6 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 52.23 | 48.15 |
| KRH05330 | Soybean | golgi, plasma membrane | 51.34 | 46.81 |
| KRH61621 | Soybean | golgi | 50.45 | 45.69 |
| KRH52289 | Soybean | golgi | 49.4 | 45.23 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 40.33 | 43.57 |
| Solyc08g069050.2.1 | Tomato | extracellular | 49.85 | 43.11 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 46.73 | 36.34 |
| Zm00001d036707_P006 | Maize | plasma membrane | 44.79 | 31.42 |
| KXG20513 | Sorghum | golgi, plasma membrane | 44.35 | 30.53 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 41.37 | 29.45 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 32.44 | 29.07 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 43.3 | 27.69 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 43.6 | 27.51 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 43.15 | 27.36 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 43.75 | 27.35 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 44.64 | 26.53 |
| AT2G22310.1 | Thale cress | nucleus | 14.14 | 26.03 |
| AT4G39910.1 | Thale cress | nucleus | 14.14 | 25.61 |
| AT1G17110.2 | Thale cress | endoplasmic reticulum, plasma membrane | 33.93 | 24.57 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 31.7 | 21.13 |
| AT3G14400.1 | Thale cress | mitochondrion | 19.79 | 20.12 |
| AT4G30890.2 | Thale cress | cytosol | 15.33 | 18.69 |
| AT5G10790.1 | Thale cress | cytosol | 15.18 | 18.31 |
| AT4G17895.1 | Thale cress | nucleus | 16.82 | 16.26 |
| AT5G57990.1 | Thale cress | nucleus | 20.09 | 15.72 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 16.67 | 15.3 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | EntrezGene:817000 | ProteinID:AAD23896.2 | ProteinID:AEC07607.1 |
| ProteinID:AEC07608.1 | EMBL:AF360315 | EMBL:AK319102 | ArrayExpress:AT2G24640 | EnsemblPlantsGene:AT2G24640 | RefSeq:AT2G24640 |
| TAIR:AT2G24640 | RefSeq:AT2G24640-TAIR-G | EnsemblPlants:AT2G24640.1 | TAIR:AT2G24640.1 | EMBL:AY056366 | Unigene:At.14198 |
| MEROPS:C19.A09 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 |
| GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | InterPro:IPR002893 | InterPro:IPR028889 | RefSeq:NP_001189593.1 |
| RefSeq:NP_565576.1 | PFAM:PF00443 | PFAM:PF01753 | PO:PO:0000013 | PO:PO:0000036 | PO:PO:0000037 |
| PO:PO:0000054 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0002000 | PO:PO:0004507 | PO:PO:0004723 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008001 | PO:PO:0008002 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0009066 | PO:PO:0009074 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 |
| PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | UniProt:Q9SJA1 | SUPFAM:SSF144232 | SUPFAM:SSF54001 |
| TMHMM:TMhelix | Symbol:UBP19 | UniParc:UPI00000A6F88 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND |
Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
Coordinates
chr2:-:10475153..10479454
Molecular Weight (calculated)
75723.5 Da
IEP (calculated)
4.736
GRAVY (calculated)
-0.561
Length
672 amino acids
Sequence
(BLAST)
(BLAST)
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.