Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028566.1-P | Field mustard | cytosol | 75.94 | 83.93 |
| CDY40119 | Canola | nucleus | 80.79 | 77.05 |
| CDX85744 | Canola | cytosol | 80.07 | 76.63 |
| VIT_04s0008g06860.t01 | Wine grape | nucleus | 59.25 | 59.67 |
| PGSC0003DMT400038315 | Potato | nucleus | 46.68 | 58.04 |
| GSMUA_Achr7P05330_001 | Banana | cytosol | 32.85 | 57.37 |
| Solyc08g068810.2.1 | Tomato | cytosol | 54.04 | 54.83 |
| KRH15753 | Soybean | nucleus | 53.86 | 54.15 |
| KRH05289 | Soybean | nucleus | 53.86 | 54.05 |
| PGSC0003DMT400086994 | Potato | cytosol | 12.75 | 53.38 |
| AT2G22310.1 | Thale cress | nucleus | 15.98 | 24.38 |
| AT4G39910.1 | Thale cress | nucleus | 15.62 | 23.45 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 18.85 | 16.64 |
| AT4G30890.2 | Thale cress | cytosol | 16.34 | 16.52 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 18.31 | 15.18 |
| AT5G65450.2 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, nucleus | 19.75 | 14.67 |
| AT3G14400.1 | Thale cress | mitochondrion | 16.34 | 13.77 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 17.24 | 13.11 |
| AT4G17895.1 | Thale cress | nucleus | 16.34 | 13.09 |
| AT5G57990.1 | Thale cress | nucleus | 18.67 | 12.11 |
| AT1G17110.2 | Thale cress | endoplasmic reticulum, plasma membrane | 20.11 | 12.07 |
| AT4G24560.1 | Thale cress | extracellular, golgi | 20.65 | 11.41 |
Protein Annotations
| MapMan:15.3.4.2.2 | MapMan:19.2.3.1.1.8 | Gene3D:3.30.40.10 | Gene3D:3.90.70.10 | EntrezGene:830946 | UniProt:A0A178UPE9 |
| ProteinID:AED91597.1 | EMBL:AF302670 | ArrayExpress:AT5G10790 | EnsemblPlantsGene:AT5G10790 | RefSeq:AT5G10790 | TAIR:AT5G10790 |
| RefSeq:AT5G10790-TAIR-G | EnsemblPlants:AT5G10790.1 | TAIR:AT5G10790.1 | MEROPS:C19.A11 | ProteinID:CAB96834.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | GO:GO:0046872 | InterPro:IPR001607 |
| InterPro:IPR013083 | InterPro:IPR028889 | RefSeq:NP_568239.1 | ProteinID:OAO95739.1 | PFAM:PF00443 | PFAM:PF02148 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00972 | PFscan:PS50235 |
| PFscan:PS50271 | PANTHER:PTHR43961 | PANTHER:PTHR43961:SF3 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | UniProt:Q9LEW0 |
| SUPFAM:SSF54001 | SUPFAM:SSF57850 | Symbol:UBP22 | UniParc:UPI00000A5859 | InterPro:USP_CS | InterPro:USP_dom |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_UBP | SEG:seg | : | : | : |
Description
UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
Coordinates
chr5:+:3410281..3413036
Molecular Weight (calculated)
63520.9 Da
IEP (calculated)
7.785
GRAVY (calculated)
-0.289
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.