CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85744	Canola	cytosol	89.55	89.86
AT5G10790.1	Thale cress	cytosol	77.05	80.79
PGSC0003DMT400038315	Potato	nucleus	44.52	58.04
VIT_04s0008g06860.t01	Wine grape	nucleus	54.79	57.87
GSMUA_Achr7P05330_001	Banana	cytosol	30.82	56.43
Solyc08g068810.2.1	Tomato	cytosol	51.2	54.46
PGSC0003DMT400086994	Potato	cytosol	12.16	53.38
KRH05289	Soybean	nucleus	49.32	51.89
KRH15753	Soybean	nucleus	49.14	51.81
CDX76934	Canola	nucleus	14.73	24.29
CDY13770	Canola	nucleus	14.73	24.16
CDY68864	Canola	nucleus	15.07	23.66
CDX69375	Canola	nucleus	14.9	23.45
CDX72275	Canola	cytosol	14.21	22.43
CDY63898	Canola	nucleus	14.9	21.86
CDY68683	Canola	endoplasmic reticulum, vacuole	15.07	18.07
CDY23262	Canola	nucleus	15.58	16.64
CDY50263	Canola	cytosol	7.71	16.61
CDX75188	Canola	vacuole	17.29	16.53
CDX68773	Canola	nucleus, plasma membrane	17.29	16.45
CDY45587	Canola	endoplasmic reticulum, vacuole	17.81	16.43
CDY20330	Canola	vacuole	17.98	16.33
CDY34761	Canola	endoplasmic reticulum, vacuole	17.81	16.15
CDX76801	Canola	endoplasmic reticulum, golgi, vacuole	17.81	15.98
CDY28224	Canola	endoplasmic reticulum, vacuole	15.75	15.59
CDX68701	Canola	endoplasmic reticulum, extracellular	15.92	15.58
CDY36465	Canola	cytosol	15.24	15.16
CDX87681	Canola	nucleus	15.75	14.6
CDY08792	Canola	vacuole	17.98	14.02
CDY37145	Canola	cytosol	15.92	13.96
CDY14564	Canola	golgi	17.98	13.78
CDY58499	Canola	endoplasmic reticulum	16.44	13.31
CDX76553	Canola	cytosol	14.55	13.24
CDX75770	Canola	mitochondrion, nucleus	14.73	12.95
CDX98449	Canola	mitochondrion	15.24	12.64
CDY02782	Canola	nucleus	17.29	12.61
CDY32735	Canola	nucleus	17.29	12.61
CDX77686	Canola	endoplasmic reticulum	16.27	12.58
CDX96790	Canola	nucleus	17.98	12.57
CDX97571	Canola	mitochondrion	15.24	12.57
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.84	12.54
CDX83925	Canola	nucleus	18.15	12.51
CDX88651	Canola	nucleus, plastid	17.64	12.5
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.66	12.44
CDY11838	Canola	nucleus, plastid	17.29	12.33
CDY55010	Canola	nucleus	17.81	12.24
CDY57464	Canola	nucleus	17.64	12.15
CDY34291	Canola	golgi	19.86	11.37
CDY11021	Canola	golgi	19.52	11.3
CDY03441	Canola	golgi	19.52	11.25
CDX92643	Canola	golgi	19.35	11.15
CDX87682	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:15.3.4.2.2	MapMan:19.2.3.1.1.8	Gene3D:3.30.40.10	Gene3D:3.90.70.10	GO:A0A078HS55	UniProt:A0A078HS55
EnsemblPlants:CDY40119	ProteinID:CDY40119	ProteinID:CDY40119.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00069044001	InterPro:IPR001607	InterPro:IPR013083
InterPro:IPR028889	PFAM:PF00443	PFAM:PF02148	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50271
PANTHER:PTHR43961	PANTHER:PTHR43961:SF3	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001	SUPFAM:SSF57850
UniParc:UPI0004EF2665	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_UBP	SEG:seg

Description

BnaC02g00110DUbiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A078HS55]

Coordinates

chrLK032463:+:284193..286564

Molecular Weight (calculated)

67027.2 Da

IEP (calculated)

8.081

GRAVY (calculated)

-0.351

Length

584 amino acids

Sequence
(BLAST)

001: MFIVHHYYEL HYYHQRDLFS QLFRPSTPFR RSRGELLLGS MEKLDLLQIK SESIVFMKHP DPCNHLSDYK LRHGTDGYKS LQNMFTPLND GRIKIKLQET
101: TRCSNCSVLH HHNSSKRLYL CLICQTVSCS SHLLSHARFN KGHDLAVDVE RSELYCSSCV DQVYDPDFDG LLVSKQVLGS LSVAVKDVVV RSSKRRRLLA
201: DSQFLVDRRE KWSYPLGLRG LNNLGSTCFM NAVLQALVHA PPLRNFWLRG QHNRDLCPRR SMGLLCLPCD LDVIFSAMFS GDRTPYSPAH LLYSWWQHST
301: NLATYEQQDS HEFFISLLDC IHENEGKSKC LYKDHEECQC ITHRAFSGLL RSDVTCTTCG STSTTYDPFI DISLTLDSAK GTKSRNSGEP SVNSPTLSGC
401: LDLFTRSEKL GPDQKLNCRS CGVKRESSKQ MSIRRLPPLL CLHVKRFEHS LTRKASRKID SYLQYPFRLN MSPYLSSSII GKRFGNRMFA FDGEGEHDGS
501: EFEIFAVVTH SGMLASGHYV TYLRLKGLWY RCDDAWINEV EEEVVRGCEC YMLFYAQERV VQKAHKELSY QVISMADAFP FVDC

Best Arabidopsis Sequence Match ( AT5G10790.1 )
(BLAST)

001: MSARISFLKN PDPCNHLSDY KLRYGTDGYK SFNNLFRCFN DARIKIKLQG IDIPRCSYCS VYQKRLYICL ICRSISCSSH ILLHTQLNKG HDIAIDVERS
101: ELYCCACIDQ VYDSEFDEVV VSKQLFGLGM SVKSGADVVA VRSNKKRRLD SQLIIGSNFL VSPRDRREKW TFPLGLRGLN NLGSTCFMNA VLQALVHAPP
201: LRNFWLSGQH NRDLCPRRTM GLLCLPCDLD VIFSAMFSGD RTPYSPAHLL YSWWQHSTNL ATYEQQDSHE FFISLLDRIH ENEGKSKCLY QDNEECQCIT
301: HKAFSGLLRS DVTCTTCGST STTYDPFIDI SLTLDSMNGF SPADCRKNRY SGGPSVNAIM PTLSGCLDFF TRSEKLGPDQ KLNCQSCGEK RESSKQMSIR
401: RLPLLLCLHV KRFEHSLTRK TSRKIDSYLQ YPFRLNMSPY LSSSIIGKRF GNRIFAFDGE GEYDSSSSSS PSAEFEIFAV VTHKGMLESG HYVTYLRLKG
501: LWYRCDDAWI NEVEEEVVRG CECYMLFYAQ ETVIQKAHKE LSYQVISMAD AFPFADC

Arabidopsis Description

UBP22Ubiquitinyl hydrolase 1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.