Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37145 | Canola | cytosol | 96.97 | 4.8 |
| CDX77686 | Canola | endoplasmic reticulum | 69.7 | 3.05 |
| CDY58499 | Canola | endoplasmic reticulum | 60.61 | 2.77 |
| CDX76553 | Canola | cytosol | 18.18 | 0.93 |
| CDY02782 | Canola | nucleus | 15.15 | 0.62 |
| CDY32735 | Canola | nucleus | 15.15 | 0.62 |
| CDY11838 | Canola | nucleus, plastid | 15.15 | 0.61 |
| CDX88651 | Canola | nucleus, plastid | 15.15 | 0.61 |
| TraesCS1D01G196500.1 | Wheat | cytosol | 9.09 | 0.53 |
| CDY57464 | Canola | nucleus | 12.12 | 0.47 |
| CDY55010 | Canola | nucleus | 12.12 | 0.47 |
| TraesCS1A01G192900.1 | Wheat | cytosol | 9.09 | 0.45 |
| CDX87681 | Canola | nucleus | 6.06 | 0.32 |
| CDY11021 | Canola | golgi | 6.06 | 0.2 |
| CDX75188 | Canola | vacuole | 3.03 | 0.16 |
| CDX68773 | Canola | nucleus, plasma membrane | 3.03 | 0.16 |
| Zm00001d047023_P001 | Maize | nucleus | 3.03 | 0.16 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 3.03 | 0.16 |
| CDY20330 | Canola | vacuole | 3.03 | 0.16 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 3.03 | 0.16 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 3.03 | 0.15 |
| OQU92076 | Sorghum | nucleus | 3.03 | 0.12 |
| CDX92643 | Canola | golgi | 3.03 | 0.1 |
| PGSC0003DMT400096420 | Potato | mitochondrion | 0.0 | 0.0 |
| CDX75770 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY63898 | Canola | nucleus | 0.0 | 0.0 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
| CDY68864 | Canola | nucleus | 0.0 | 0.0 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| CDX72275 | Canola | cytosol | 0.0 | 0.0 |
| TraesCS1B01G207800.1 | Wheat | cytosol, nucleus, plastid | 0.0 | 0.0 |
| CDX69375 | Canola | nucleus | 0.0 | 0.0 |
| TraesCS1D01G196600.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3B01G442400.1 | Wheat | cytosol | 0.0 | 0.0 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| CDX76934 | Canola | nucleus | 0.0 | 0.0 |
| CDY50263 | Canola | cytosol | 0.0 | 0.0 |
| CDX98449 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY40119 | Canola | nucleus | 0.0 | 0.0 |
| CDX83925 | Canola | nucleus | 0.0 | 0.0 |
| CDY36465 | Canola | cytosol | 0.0 | 0.0 |
| CDY34291 | Canola | golgi | 0.0 | 0.0 |
| CDX85744 | Canola | cytosol | 0.0 | 0.0 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
| CDY23262 | Canola | nucleus | 0.0 | 0.0 |
| CDY14564 | Canola | golgi | 0.0 | 0.0 |
| CDY13770 | Canola | nucleus | 0.0 | 0.0 |
| CDX96790 | Canola | nucleus | 0.0 | 0.0 |
| CDY08792 | Canola | vacuole | 0.0 | 0.0 |
| CDY03441 | Canola | golgi | 0.0 | 0.0 |
| CDX97571 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX87682 | EnsemblPlantsGene:GSBRNA2T00146696001 | ProteinID:CDX87682 | ProteinID:CDX87682.1 | UniParc:UPI0004EEE34C | MapMan:35.2 |
Description
BnaC02g32670D
Coordinates
chrLK031851:+:123798..124050
Molecular Weight (calculated)
3717.5 Da
IEP (calculated)
12.102
GRAVY (calculated)
-0.667
Length
33 amino acids
Sequence
(BLAST)
(BLAST)
1: MLAAAIGVEV KKKNISNIRR SNLHRNLSER PSN
001: MNLISRTLTR AVSSSLYHSK AAKLPTQKWI ISQQIRVFSA TVISGGGKKP LAKVSVKPPL NVATEKESTP PKKIEYKPEI SNWINLIGFV EQPVQFGPCS
101: DGKFWAGTVI SQRSGSKSSN FWIPIIFEGD LAKIAVQHVK KEDRIHVSGK LFIDSPPPNV TYSQSNVQVM VQNLNFVQAA TSTTKTISPP EKEVTSIKKK
201: PARSKKVKVI DEETSNSWKH LIENPKEWLD HRGNKANGLV KPGHPDFKMK VGGLSLWLST APDWALLKLE ELKFDVLVPK GNIKLNQLKD IGEESWKDLV
301: QNPDKWLDNR SDKTNVKYPD FKHKETGEAL WMTNSPIWVL SKLPPLKKNQ ERPFMSNKVS QLELDVEVPK GNLKQLKREE IWKNLVENPS KWWDNRLDKR
401: NPKGPDFKHK ETGEALWIGD SPTWALSKLP PLKKNQERPV MA
101: DGKFWAGTVI SQRSGSKSSN FWIPIIFEGD LAKIAVQHVK KEDRIHVSGK LFIDSPPPNV TYSQSNVQVM VQNLNFVQAA TSTTKTISPP EKEVTSIKKK
201: PARSKKVKVI DEETSNSWKH LIENPKEWLD HRGNKANGLV KPGHPDFKMK VGGLSLWLST APDWALLKLE ELKFDVLVPK GNIKLNQLKD IGEESWKDLV
301: QNPDKWLDNR SDKTNVKYPD FKHKETGEAL WMTNSPIWVL SKLPPLKKNQ ERPFMSNKVS QLELDVEVPK GNLKQLKREE IWKNLVENPS KWWDNRLDKR
401: NPKGPDFKHK ETGEALWIGD SPTWALSKLP PLKKNQERPV MA
Arabidopsis Description
OSB3Organellar single-stranded DNA binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4KBP3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.