Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007837.1-P | Field mustard | nucleus | 75.27 | 96.08 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 94.62 | 95.65 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 81.57 | 83.89 |
| CDY20330 | Canola | vacuole | 82.49 | 83.51 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 80.49 | 77.98 |
| CDX68773 | Canola | nucleus, plasma membrane | 62.98 | 66.78 |
| CDX75188 | Canola | vacuole | 61.6 | 65.63 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 33.49 | 62.64 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 42.86 | 59.74 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 52.23 | 46.64 |
| KRH05330 | Soybean | golgi, plasma membrane | 52.07 | 46.0 |
| KRH61621 | Soybean | golgi | 51.46 | 45.15 |
| KRH52289 | Soybean | golgi | 50.54 | 44.82 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 41.32 | 43.25 |
| Solyc08g069050.2.1 | Tomato | extracellular | 51.15 | 42.86 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 48.08 | 36.23 |
| Zm00001d036707_P006 | Maize | plasma membrane | 45.78 | 31.11 |
| KXG20513 | Sorghum | golgi, plasma membrane | 45.78 | 30.53 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 42.4 | 29.24 |
| CDY08792 | Canola | vacuole | 33.49 | 29.11 |
| CDY14564 | Canola | golgi | 33.49 | 28.61 |
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 44.09 | 26.95 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 43.78 | 26.89 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 44.39 | 26.88 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 43.32 | 26.83 |
| CDX96790 | Canola | nucleus | 34.41 | 26.83 |
| CDX83925 | Canola | nucleus | 34.72 | 26.68 |
| CDY65125 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.64 | 26.45 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 45.78 | 26.35 |
| CDX76934 | Canola | nucleus | 14.29 | 26.27 |
| CDY48465 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 35.18 | 26.14 |
| CDY13770 | Canola | nucleus | 14.29 | 26.12 |
| CDX72275 | Canola | cytosol | 14.75 | 25.95 |
| CDY68864 | Canola | nucleus | 14.44 | 25.27 |
| CDX69375 | Canola | nucleus | 14.29 | 25.07 |
| CDY63898 | Canola | nucleus | 14.29 | 23.37 |
| CDY11021 | Canola | golgi | 34.1 | 22.0 |
| CDX92643 | Canola | golgi | 33.95 | 21.82 |
| CDY03441 | Canola | golgi | 33.49 | 21.52 |
| CDY34291 | Canola | golgi | 33.49 | 21.37 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 14.44 | 19.3 |
| CDX75770 | Canola | mitochondrion, nucleus | 19.51 | 19.13 |
| CDX98449 | Canola | mitochondrion | 20.28 | 18.75 |
| CDX97571 | Canola | mitochondrion | 20.12 | 18.5 |
| CDY23262 | Canola | nucleus | 15.36 | 18.28 |
| CDX85744 | Canola | cytosol | 15.98 | 17.87 |
| CDY40119 | Canola | nucleus | 15.98 | 17.81 |
| CDX76553 | Canola | cytosol | 17.2 | 17.45 |
| CDY36465 | Canola | cytosol | 15.67 | 17.38 |
| CDY28224 | Canola | endoplasmic reticulum, vacuole | 15.51 | 17.12 |
| CDX88651 | Canola | nucleus, plastid | 21.66 | 17.11 |
| CDX68701 | Canola | endoplasmic reticulum, extracellular | 15.51 | 16.92 |
| CDY11838 | Canola | nucleus, plastid | 21.2 | 16.85 |
| CDX87681 | Canola | nucleus | 16.28 | 16.83 |
| CDY32735 | Canola | nucleus | 20.58 | 16.73 |
| CDY02782 | Canola | nucleus | 20.58 | 16.73 |
| CDY37145 | Canola | cytosol | 16.9 | 16.52 |
| CDY55010 | Canola | nucleus | 21.35 | 16.35 |
| CDY57464 | Canola | nucleus | 21.04 | 16.16 |
| CDY58499 | Canola | endoplasmic reticulum | 17.82 | 16.09 |
| CDX77686 | Canola | endoplasmic reticulum | 18.43 | 15.89 |
| CDY50263 | Canola | cytosol | 6.61 | 15.87 |
| CDX87682 | Canola | cytosol | 0.15 | 3.03 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:A0A078CHV4 | EnsemblPlants:CDX76801 | ProteinID:CDX76801 |
| ProteinID:CDX76801.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | EnsemblPlantsGene:GSBRNA2T00127300001 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 | PFAM:PF01753 |
| ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45499 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EDBF10 | InterPro:USP_CS |
| InterPro:USP_dom | InterPro:Znf_MYND | SEG:seg | : | : | : |
Description
BnaC08g33870D
Coordinates
chrLK031808:+:1164913..1168301
Molecular Weight (calculated)
71987.3 Da
IEP (calculated)
4.787
GRAVY (calculated)
-0.400
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MHEVGSTWDL NFFTQLVLTL LILSLGLLFF VKRTAANYFE VGGASGGFHR RNFMVPPDAA ECSVCGKLST KKCSRCKSVR YCSAECQKSD WNSGHKLQCK
101: VFKSSGSSPV RKDDLDFKAS LFGNRTVSKT ALSPKLSQSK AVVVKPGDVL FPYETFVNYF NWDKPTLAPC GLTNCGNSCF ANVVLQCLSW TRPLVAYLLE
201: RGHKRECKRN DWCFFCEFET HLERANMSRF PFSPMNIISR LPNIGGNLGY GRQEDAHELM RFVIDMMQSV CLDEFGGEKA VPPRAQETTL IQHIFGGLLQ
301: SQVKCTVCSN VSDQYENMMD LTVEIHGDAV SLEECLDQFT AKEWLQGDNL YKCDRCNDYV KACKRLSIRS APNILTIALK RFQGGRFGKL NKRIGFPETF
401: DLGPYTSGGG EGSDVYNLYA VIVHLDMLNA SFFGHYICYV KDLRGDWYRI DDSEVEKVEL EDVLSQRAYM LLYSRVQTRP SSLRPEEVQD EKKTDTLNIE
501: SSQDGSVESS GVGANVSSLC NGISISHSEG SSSSSLSSSV SVSEKEGEVA ERVDTVDSES NPSIDMEHDS GTDNQEGEVV NGKENPTVEE PAIDSSCSDN
601: NASSPSAATE NSTVEDPACS DITTSSPSAA IESNHQEEKE GSDTKMIDDA Q
101: VFKSSGSSPV RKDDLDFKAS LFGNRTVSKT ALSPKLSQSK AVVVKPGDVL FPYETFVNYF NWDKPTLAPC GLTNCGNSCF ANVVLQCLSW TRPLVAYLLE
201: RGHKRECKRN DWCFFCEFET HLERANMSRF PFSPMNIISR LPNIGGNLGY GRQEDAHELM RFVIDMMQSV CLDEFGGEKA VPPRAQETTL IQHIFGGLLQ
301: SQVKCTVCSN VSDQYENMMD LTVEIHGDAV SLEECLDQFT AKEWLQGDNL YKCDRCNDYV KACKRLSIRS APNILTIALK RFQGGRFGKL NKRIGFPETF
401: DLGPYTSGGG EGSDVYNLYA VIVHLDMLNA SFFGHYICYV KDLRGDWYRI DDSEVEKVEL EDVLSQRAYM LLYSRVQTRP SSLRPEEVQD EKKTDTLNIE
501: SSQDGSVESS GVGANVSSLC NGISISHSEG SSSSSLSSSV SVSEKEGEVA ERVDTVDSES NPSIDMEHDS GTDNQEGEVV NGKENPTVEE PAIDSSCSDN
601: NASSPSAATE NSTVEDPACS DITTSSPSAA IESNHQEEKE GSDTKMIDDA Q
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.