Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G485600.1 | Wheat | golgi, plasma membrane | 94.33 | 95.21 |
| TraesCS7A01G498400.1 | Wheat | extracellular, golgi, plasma membrane | 93.02 | 94.34 |
| HORVU7Hr1G111430.5 | Barley | cytosol, nucleus | 85.95 | 87.92 |
| KXG20513 | Sorghum | golgi, plasma membrane | 58.88 | 64.86 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 27.07 | 62.31 |
| Zm00001d036707_P006 | Maize | plasma membrane | 55.16 | 61.9 |
| Os06t0654000-01 | Rice | cytosol, nucleus | 53.86 | 61.33 |
| PGSC0003DMT400076065 | Potato | endoplasmic reticulum | 17.86 | 55.17 |
| Bra007837.1-P | Field mustard | nucleus | 22.05 | 46.47 |
| Bra032080.1-P | Field mustard | endoplasmic reticulum, vacuole | 26.98 | 45.96 |
| CDY45587 | Canola | endoplasmic reticulum, vacuole | 26.79 | 45.5 |
| CDY20330 | Canola | vacuole | 26.88 | 44.95 |
| Bra011290.1-P | Field mustard | vacuole | 25.49 | 44.77 |
| KRH15706 | Soybean | golgi, plasma membrane, vacuole | 30.23 | 44.58 |
| AT4G31670.1 | Thale cress | endoplasmic reticulum, golgi | 26.14 | 44.53 |
| KRH52289 | Soybean | golgi | 30.33 | 44.41 |
| CDX76801 | Canola | endoplasmic reticulum, golgi, vacuole | 26.88 | 44.39 |
| CDX75188 | Canola | vacuole | 25.21 | 44.35 |
| KRH61621 | Soybean | golgi | 30.6 | 44.34 |
| CDY34761 | Canola | endoplasmic reticulum, vacuole | 26.51 | 44.25 |
| CDX68773 | Canola | nucleus, plasma membrane | 25.21 | 44.14 |
| AT2G24640.1 | Thale cress | endoplasmic reticulum, vacuole | 27.35 | 43.75 |
| KRH05330 | Soybean | golgi, plasma membrane | 29.95 | 43.69 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 24.84 | 42.93 |
| Solyc08g069050.2.1 | Tomato | extracellular | 29.12 | 40.28 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 29.4 | 36.57 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 32.19 | 30.59 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 9.02 | 26.5 |
| TraesCS2B01G544700.1 | Wheat | mitochondrion | 8.93 | 25.95 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 20.37 | 23.91 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 21.58 | 23.58 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 9.4 | 23.43 |
| TraesCS6B01G223900.1 | Wheat | plastid | 8.47 | 21.72 |
| TraesCS7B01G179000.2 | Wheat | plastid | 19.91 | 21.55 |
| TraesCS1B01G342600.2 | Wheat | plastid | 11.16 | 18.58 |
| TraesCS3B01G442400.1 | Wheat | cytosol | 10.14 | 17.52 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 14.14 | 16.19 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 11.07 | 16.1 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 14.14 | 14.22 |
| TraesCS1B01G207800.1 | Wheat | cytosol, nucleus, plastid | 11.26 | 14.07 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 9.02 | 12.58 |
Protein Annotations
| MapMan:19.2.3.1.1.7 | Gene3D:3.30.60.180 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR002893 | InterPro:IPR028889 | PFAM:PF00443 |
| PFAM:PF01753 | ScanProsite:PS00972 | ScanProsite:PS01360 | PFscan:PS50235 | PFscan:PS50865 | PANTHER:PTHR45499 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF144232 | SUPFAM:SSF54001 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G405400 |
| EnsemblPlants:TraesCS7B01G405400.1 | InterPro:USP_CS | InterPro:USP_dom | InterPro:Znf_MYND | TIGR:cd02661 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:673955607..673963024
Molecular Weight (calculated)
117466.0 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.582
Length
1075 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPGGGIGAGL DFDFPAVIQA ALVGFVLLAA AAAAALRRAA SRYFLVDAAG FAAAYEDHHH HHPAYAMPPQ GDQATTPPPP PQPPSSPLGQ QAAAPELGPC
0101: AHCGAAGTKK CSGCKRMRYC SGECQSKHWQ SDHKFKCKQM KLLDPIDKLP CGVEANSKKS PVSGHRGISL VPGHRKLNKV IYPYDDFLKL YNWNYNDSKY
0201: GEFLTCGLVN CGNSCFANVV LQCLSYTRPL VAYLLGKDHY RQCTIRHEDW CFLCELQSHI QRAFDSVHPF APMNILSHLP NIGGNLGFGR QEDAHEFMRF
0301: AIDKMQSACL DEFGGEKVVD HSTQETTVIQ HIFGGRLQSQ VQCTACGMVS NRYENMMDLT VEIHGDAESL EKCLDQFTAI EWLDGDNKYK CDGCNDYVKA
0401: RKHLTVHQAP NILTITLKRF QSGRFGKLNK KVTFPTKLDL TPYMSTTDGT DQYDLYAVVV HLDMLNASFF GHYICYIKHY RGRWLKLDDC KGNVVEEEEV
0501: HAQGAYMLLY SRRTARPVPL LPVKEPIKDE KQCKVPPLNG QNHLIPEDVS LKCESFSKST EDLREDSESS NQSLHRMDTV DQVSDLDLHM NIERDKFVTN
0601: GSIHQPISSA LHVLEEDTRD SRSLLEGNNS MRADQSGNSA CESSSVNSSE EECKEPAPDI DSVDYMDIDV EAGTEVETQN VQQQPILGDS VGVIRNKTSV
0701: PTFENCMAGK PKPLFSLGFL DKPSRKKSDS REECQNGGSM AVSSQKIDGH CNEHLSRPEQ GLIANSRGGS PSSANGSVRC NGDVFVTPNN GVLVNGDTQS
0801: DNYSLDVAKR DVPSVQGFTP RPCRSPSSSN PNRNNTSKGD MSFFPRGFLA KPRSGEKAVK VDDGLPFSDG NGKPSSSSSV NGNGISNTNS SHRSSTGGMG
0901: MSPGFLAKRS RESAAASFMG DPQSSNTSKE QEHVGAAALL PDKIQEGRSS YCTTNGIEAQ DGAASVHDVS GHSDENGHAF MGTKNGIHGE ENGSNGTLDM
1001: HDSSCQMDEN GHGVLDIKDV IFREQNVSNG TLDTHGMGSE DADHVVKSPA APAHDGLRRR LTTSKYFDES SMDEQ
0101: AHCGAAGTKK CSGCKRMRYC SGECQSKHWQ SDHKFKCKQM KLLDPIDKLP CGVEANSKKS PVSGHRGISL VPGHRKLNKV IYPYDDFLKL YNWNYNDSKY
0201: GEFLTCGLVN CGNSCFANVV LQCLSYTRPL VAYLLGKDHY RQCTIRHEDW CFLCELQSHI QRAFDSVHPF APMNILSHLP NIGGNLGFGR QEDAHEFMRF
0301: AIDKMQSACL DEFGGEKVVD HSTQETTVIQ HIFGGRLQSQ VQCTACGMVS NRYENMMDLT VEIHGDAESL EKCLDQFTAI EWLDGDNKYK CDGCNDYVKA
0401: RKHLTVHQAP NILTITLKRF QSGRFGKLNK KVTFPTKLDL TPYMSTTDGT DQYDLYAVVV HLDMLNASFF GHYICYIKHY RGRWLKLDDC KGNVVEEEEV
0501: HAQGAYMLLY SRRTARPVPL LPVKEPIKDE KQCKVPPLNG QNHLIPEDVS LKCESFSKST EDLREDSESS NQSLHRMDTV DQVSDLDLHM NIERDKFVTN
0601: GSIHQPISSA LHVLEEDTRD SRSLLEGNNS MRADQSGNSA CESSSVNSSE EECKEPAPDI DSVDYMDIDV EAGTEVETQN VQQQPILGDS VGVIRNKTSV
0701: PTFENCMAGK PKPLFSLGFL DKPSRKKSDS REECQNGGSM AVSSQKIDGH CNEHLSRPEQ GLIANSRGGS PSSANGSVRC NGDVFVTPNN GVLVNGDTQS
0801: DNYSLDVAKR DVPSVQGFTP RPCRSPSSSN PNRNNTSKGD MSFFPRGFLA KPRSGEKAVK VDDGLPFSDG NGKPSSSSSV NGNGISNTNS SHRSSTGGMG
0901: MSPGFLAKRS RESAAASFMG DPQSSNTSKE QEHVGAAALL PDKIQEGRSS YCTTNGIEAQ DGAASVHDVS GHSDENGHAF MGTKNGIHGE ENGSNGTLDM
1001: HDSSCQMDEN GHGVLDIKDV IFREQNVSNG TLDTHGMGSE DADHVVKSPA APAHDGLRRR LTTSKYFDES SMDEQ
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.