Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G339500.1 | Wheat | nucleus | 91.58 | 94.77 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 89.71 | 89.54 |
| Os02t0795000-01 | Rice | nucleus | 55.47 | 50.04 |
| KRH72298 | Soybean | cytosol, plastid | 23.2 | 48.82 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 41.63 | 47.39 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 25.73 | 45.83 |
| CDY11838 | Canola | nucleus, plastid | 28.06 | 36.63 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 33.02 | 36.54 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 30.4 | 36.35 |
| CDY57464 | Canola | nucleus | 28.72 | 36.2 |
| CDX88651 | Canola | nucleus, plastid | 27.88 | 36.16 |
| KRH03060 | Soybean | nucleus | 30.31 | 35.88 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 27.88 | 35.86 |
| CDY02782 | Canola | nucleus | 26.66 | 35.58 |
| PGSC0003DMT400028924 | Potato | nucleus | 30.78 | 35.53 |
| Solyc07g005530.2.1 | Tomato | nucleus | 30.59 | 35.43 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 33.02 | 35.41 |
| CDY32735 | Canola | nucleus | 26.38 | 35.21 |
| CDY55010 | Canola | nucleus | 27.88 | 35.06 |
| Bra020400.1-P | Field mustard | nucleus | 26.85 | 34.45 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 26.94 | 33.92 |
| AT5G57990.1 | Thale cress | nucleus | 27.03 | 33.64 |
| Bra002683.1-P | Field mustard | nucleus | 29.0 | 31.57 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 9.73 | 28.42 |
| TraesCS2B01G408400.1 | Wheat | cytosol | 10.38 | 25.75 |
| TraesCS2B01G544700.1 | Wheat | mitochondrion | 8.42 | 24.32 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 16.74 | 24.22 |
| TraesCS6B01G223900.1 | Wheat | plastid | 8.7 | 22.2 |
| TraesCS1B01G342600.2 | Wheat | plastid | 13.19 | 21.83 |
| TraesCS3B01G442400.1 | Wheat | cytosol | 12.07 | 20.74 |
| TraesCS1B01G207800.1 | Wheat | cytosol, nucleus, plastid | 12.72 | 15.81 |
| TraesCS7B01G179000.2 | Wheat | plastid | 13.47 | 14.5 |
| TraesCS5B01G243400.1 | Wheat | vacuole | 12.35 | 14.41 |
| TraesCS7B01G405400.1 | Wheat | golgi, plasma membrane | 14.22 | 14.14 |
| TraesCS6B01G231700.4 | Wheat | plasma membrane | 12.25 | 13.31 |
| TraesCS2B01G149000.2 | Wheat | cytosol | 9.17 | 12.71 |
Protein Annotations
| MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | ScanProsite:PS00972 |
| ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH |
| SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS6B01G389500 | EnsemblPlants:TraesCS6B01G389500.1 | InterPro:USP_CS | InterPro:USP_dom | TIGR:cd02661 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:664290033..664295832
Molecular Weight (calculated)
116463.0 Da
IEP (calculated)
7.789
GRAVY (calculated)
-0.555
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEAAAAHRR IQFHAAARQG AGAAGGAPMR RPYQNPDRRL ALAAAAAREK KGEAGAGGLD RELAAARVYL RRIGAGLHNL GNTCYLNSVL QCLTYTEPFV
0101: AYLQSGKHTS SSCRAAGFCA LCALQNHVRC ALQSTGKILT PVQFVKNLKC ISRSFRYYRQ EDAHELMVNL LESMHKCCLP SGIPSQSPSA YETSLVHRIF
0201: GGRLRSQVRC ASCSHCSSKF DPFLDLSLEI ANAATLVKAL QNFTEEEALD GGEKQYNCQS CKKKVVAKKR FTIDKAPDVL TIHLKRFSPF NPGQKINKKV
0301: DFQSTLNLKP FVSNSEGMDF RYSLYGVLVH AGWNTQSGHY YCFVRTSSGI WHNLDDNEVC QVREADVLRQ KAYMLFYVRD RVRSSVMFKN NGAAGSLVKN
0401: AISEKTANMN GTIRNGLMEA KLNVPSFTNG DVKSQKQNPD DGRPSIFGSS SQGQCSKYSS STGVIEAAAV QNNGVQNNGM VSVQTAAATL SINTTKTTSD
0501: SAREIVSSAQ PDVTVPHNSS CDPKAYEKPL QEQQPESDGA FTDSGKGSTA ALPICNGGDG MLEENHQASE PRTDPCGEQT LNTSKPAESA EIKKTKHTML
0601: SVSNGTMPSR EDLTCCNEAK ESAESGKQPD EIAMEELSAE STGAITNAVE QTSVQTKTAE VGQATVEELY VKDTDCIANA QEQASMQNKD LVAGQAHSEA
0701: HIYSEVSAQP ICPEVSSLAI CPEVSSLAIC PEVSAQAICP EVSPQAICPE VSAQAICPED PAQAICPEVS AQAICPEVPA QVICPEVPAH VICPEASAQV
0801: ICPEDPAQVL DKDPCHGNLR TMKDLKSKKH TDYSTVHLLF VSKQPLLAAL KLHKKRKHKR AKRQSIDNGI IADDQQTSTS ETVFTKDISC KSHRRRKRSR
0901: APASSDNGVE ISTKKPHLAE RSSSAADLPV DKKDDKDATP ASAELPGPCV SSVADQTDSR NSADANERVP SHFDLLTRGL SEITVPLWDD TDMSGRKSEF
1001: QYSRRAESIG YVLDEWDEQY DRGKRKKVRK PREESNGPNP FQEAADVRAR PRKRPRSDQA RWGNQPRRI
0101: AYLQSGKHTS SSCRAAGFCA LCALQNHVRC ALQSTGKILT PVQFVKNLKC ISRSFRYYRQ EDAHELMVNL LESMHKCCLP SGIPSQSPSA YETSLVHRIF
0201: GGRLRSQVRC ASCSHCSSKF DPFLDLSLEI ANAATLVKAL QNFTEEEALD GGEKQYNCQS CKKKVVAKKR FTIDKAPDVL TIHLKRFSPF NPGQKINKKV
0301: DFQSTLNLKP FVSNSEGMDF RYSLYGVLVH AGWNTQSGHY YCFVRTSSGI WHNLDDNEVC QVREADVLRQ KAYMLFYVRD RVRSSVMFKN NGAAGSLVKN
0401: AISEKTANMN GTIRNGLMEA KLNVPSFTNG DVKSQKQNPD DGRPSIFGSS SQGQCSKYSS STGVIEAAAV QNNGVQNNGM VSVQTAAATL SINTTKTTSD
0501: SAREIVSSAQ PDVTVPHNSS CDPKAYEKPL QEQQPESDGA FTDSGKGSTA ALPICNGGDG MLEENHQASE PRTDPCGEQT LNTSKPAESA EIKKTKHTML
0601: SVSNGTMPSR EDLTCCNEAK ESAESGKQPD EIAMEELSAE STGAITNAVE QTSVQTKTAE VGQATVEELY VKDTDCIANA QEQASMQNKD LVAGQAHSEA
0701: HIYSEVSAQP ICPEVSSLAI CPEVSSLAIC PEVSAQAICP EVSPQAICPE VSAQAICPED PAQAICPEVS AQAICPEVPA QVICPEVPAH VICPEASAQV
0801: ICPEDPAQVL DKDPCHGNLR TMKDLKSKKH TDYSTVHLLF VSKQPLLAAL KLHKKRKHKR AKRQSIDNGI IADDQQTSTS ETVFTKDISC KSHRRRKRSR
0901: APASSDNGVE ISTKKPHLAE RSSSAADLPV DKKDDKDATP ASAELPGPCV SSVADQTDSR NSADANERVP SHFDLLTRGL SEITVPLWDD TDMSGRKSEF
1001: QYSRRAESIG YVLDEWDEQY DRGKRKKVRK PREESNGPNP FQEAADVRAR PRKRPRSDQA RWGNQPRRI
001: MHEVGLFVDL NSFTQLILTL FFVSIGLLYF VKRTAAKYFE VGGGSGGFDR DHRRDFMVSD TAECSVCGKA TTKKCSRCKS VRYCSAACQT SDWKSGHKLK
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
101: CKGFRSTDSS PVRRDDIDFE ASLFGNRSAS KKTRIALVPQ QSQSKATLKP TDVLFPYESF VRYYNWDRPI MAPCGLTNCG NSCFANVVLQ CLSWTRPLVA
201: YLLERGHKRE CRRNDWCFLC EFENHLDRAN YSRFPFSPMN IISRLPNIGG NLGYGRQEDA HELMRFAIDM MQSVCLDEFG GEKVVPPRAQ ETTLIQYIFG
301: GLLQSQVQCT ACSNVSDQYE NMMDLTVEIH GDAVSLEECL DQFTAKEWLQ GDNLYKCDRC DDYVKACKRL SIRCAPNILT IALKRFQGGR FGKLNKRISF
401: PETFDLGPYM SGGGEGSDVY KLYAVIVHLD MLNASFFGHY ICYVKDFRGN WYRIDDSEVE KVELEDVLSQ RAYMLLYSRV QPRPSNLRSE ESQDEKKTDT
501: LNTESNQDGS VESSGVGTND TSVSSLCNGI ISHSEDPEYE KESSLSASVP VSEEGKEVDV KVDTVDSESN RSIDMEHDSG TDHQEEEANG KEDPTVENLA
601: VDSSCLDITT PSPSAATEFI PQENERSDTE SKPLEKEHSD TESNKPLEKE HLDSESKPLE KEHSDTEMID AQ
Arabidopsis Description
UBP19Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.