Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 82.55 | 92.06 |
| KRH72298 | Soybean | cytosol, plastid | 32.9 | 64.57 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 32.4 | 53.83 |
| KRH03060 | Soybean | nucleus | 47.34 | 52.27 |
| Solyc07g005530.2.1 | Tomato | nucleus | 45.64 | 49.3 |
| PGSC0003DMT400028924 | Potato | nucleus | 45.74 | 49.24 |
| CDY11838 | Canola | nucleus, plastid | 38.21 | 46.52 |
| CDX88651 | Canola | nucleus, plastid | 38.01 | 46.0 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 38.01 | 45.61 |
| CDY02782 | Canola | nucleus | 36.01 | 44.82 |
| CDY32735 | Canola | nucleus | 35.61 | 44.32 |
| AT5G57990.1 | Thale cress | nucleus | 37.61 | 43.66 |
| CDY55010 | Canola | nucleus | 36.91 | 43.29 |
| CDY57464 | Canola | nucleus | 36.81 | 43.28 |
| Bra020400.1-P | Field mustard | nucleus | 36.01 | 43.1 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 41.12 | 42.44 |
| Os06t0184300-01 | Rice | mitochondrion | 37.21 | 40.15 |
| EER89337 | Sorghum | nucleus | 35.81 | 38.93 |
| Zm00001d045104_P005 | Maize | nucleus | 35.01 | 38.65 |
| HORVU7Hr1G030300.1 | Barley | nucleus | 36.01 | 38.6 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 36.21 | 38.45 |
| Bra002683.1-P | Field mustard | nucleus | 37.81 | 38.39 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 35.91 | 38.21 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 32.5 | 38.16 |
| TraesCS7A01G147900.1 | Wheat | nucleus | 35.01 | 37.89 |
| TraesCS6D01G339500.1 | Wheat | nucleus | 35.41 | 34.17 |
| TraesCS6B01G389500.1 | Wheat | nucleus | 35.41 | 33.02 |
| TraesCS6A01G357500.1 | Wheat | mitochondrion, nucleus | 35.11 | 32.68 |
| Os02t0795000-01 | Rice | nucleus | 36.61 | 30.8 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 10.03 | 27.1 |
| VIT_11s0118g00280.t01 | Wine grape | mitochondrion | 7.12 | 25.09 |
| VIT_19s0093g00560.t01 | Wine grape | mitochondrion | 15.55 | 24.41 |
| VIT_09s0070g00500.t01 | Wine grape | golgi, mitochondrion, nucleus, peroxisome | 8.73 | 24.3 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 12.64 | 24.0 |
| VIT_04s0008g06860.t01 | Wine grape | nucleus | 11.03 | 19.89 |
| VIT_13s0019g01690.t01 | Wine grape | cytosol | 10.83 | 19.53 |
| VIT_00s0407g00030.t01 | Wine grape | golgi, vacuole | 14.04 | 18.92 |
| VIT_04s0069g00760.t01 | Wine grape | nucleus | 15.75 | 18.17 |
| VIT_00s0199g00030.t01 | Wine grape | vacuole | 16.15 | 17.83 |
| VIT_19s0140g00200.t01 | Wine grape | plasma membrane | 16.05 | 16.05 |
| VIT_11s0118g00290.t01 | Wine grape | nucleus | 5.02 | 14.2 |
| VIT_18s0001g07370.t01 | Wine grape | golgi, vacuole | 17.05 | 13.88 |
Protein Annotations
| EntrezGene:100248233 | wikigene:100248233 | MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | ProteinID:CCB60948 | ProteinID:CCB60948.1 |
| UniProt:F6I1Y1 | EMBL:FN596519 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | EntrezGene:LOC100248233 | wikigene:LOC100248233 | PFAM:PF00443 |
| ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0002109765 | InterPro:USP_CS | InterPro:USP_dom | ArrayExpress:VIT_00s0174g00260 |
| EnsemblPlantsGene:VIT_00s0174g00260 | EnsemblPlants:VIT_00s0174g00260.t01 | RefSeq:XP_003634989 | RefSeq:XP_003634989.1 | RefSeq:XP_010646085.1 | SEG:seg |
Description
No Description!
Coordinates
chrUn:-:7133698..7146702
Molecular Weight (calculated)
109289.0 Da
IEP (calculated)
10.050
GRAVY (calculated)
-0.642
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEALISNPE ANAQENGPSA SPHPSSAGSL FHRRIDFHLT RKPYSGFTNG SGGFRLETLN PTTDPKRSGH STGPAASSGK KQDGSDHVEN GLDPELSIGI
101: TVRRIGAGLE NLGNTCFLNS VLQCLTYTEP LAAYLQSGKH QNSCHIAGFC ALCAIQKHVS RALQSTGRIL APKDLVSNLR CISRNFRNAR QEDAHEYMVN
201: LLETMHKCCL PSGVPSESPS AYEKSLVHKI FGGLLRSQVK CMQCSYCSNK FDPFLDLSLE IFKADSLHKA LMHFTATEQL DGGERQYQCQ RCKQKVKALK
301: QLTVHKAPYV LTIHLKRFGA HDPGQKIDKK VHFGPTMDLK PFVSGSYEEN LKYTLYGVLV HAGWSTHSGH YYCFVRTSTG MWYSLDDNRV VQVSERTVLD
401: QKAYMLFYVR DRKNFTPKKS IDVVQKQNLV ASAIAKKTYS SVSQGLKETI QNGPVEKSLR GVVASAAVTK NDVSNVGLSK ESLSKEASAP KSSRFSSECL
501: ALKNGPMSEP SPNVALSKQQ VKGPPVLNPT LEKSMPPSAP SVKGSSDCLA LKKGPMSKPS PNVALSKQRV KGPPVLNPTL EKSMPPSALS VKGSGITNLG
601: NAIAATTSAK FNERSEDEIS KKDQGILDVI QANCIGSQNS AADKPDSGKT SPKVSIISNA DETLDKVEPV KLPNGPSGEN FQVDSMPKGS AAGDSLIEKA
701: DDGGQKLSTK TVEFSSPSSM MNGSIHMKTL DCKPHRKFKK KNMKCRMRSM HLVSNNLFRA SLSLRKKKKH RRSKRHTSDI KNLTQEHLLE AGCLSVGQGP
801: STSDKTQTTS VGPTNRWGKR VKHGTKKGDK RTAGKDVKTS NSECVMDTMD VEFRDRIGEE GAMLATDKEP QKSSISVAKQ RDAQRSDSLN DSKRDQMQNG
901: LMSMLTRGLD ETIVARWDEI EWPSNRVMES RSVEGVTIGY VPDEWDEEYD RGKRKKVRSS NGSFGGPNPF QEIATKKAHF KKAKKDRSSS GNQPFRI
101: TVRRIGAGLE NLGNTCFLNS VLQCLTYTEP LAAYLQSGKH QNSCHIAGFC ALCAIQKHVS RALQSTGRIL APKDLVSNLR CISRNFRNAR QEDAHEYMVN
201: LLETMHKCCL PSGVPSESPS AYEKSLVHKI FGGLLRSQVK CMQCSYCSNK FDPFLDLSLE IFKADSLHKA LMHFTATEQL DGGERQYQCQ RCKQKVKALK
301: QLTVHKAPYV LTIHLKRFGA HDPGQKIDKK VHFGPTMDLK PFVSGSYEEN LKYTLYGVLV HAGWSTHSGH YYCFVRTSTG MWYSLDDNRV VQVSERTVLD
401: QKAYMLFYVR DRKNFTPKKS IDVVQKQNLV ASAIAKKTYS SVSQGLKETI QNGPVEKSLR GVVASAAVTK NDVSNVGLSK ESLSKEASAP KSSRFSSECL
501: ALKNGPMSEP SPNVALSKQQ VKGPPVLNPT LEKSMPPSAP SVKGSSDCLA LKKGPMSKPS PNVALSKQRV KGPPVLNPTL EKSMPPSALS VKGSGITNLG
601: NAIAATTSAK FNERSEDEIS KKDQGILDVI QANCIGSQNS AADKPDSGKT SPKVSIISNA DETLDKVEPV KLPNGPSGEN FQVDSMPKGS AAGDSLIEKA
701: DDGGQKLSTK TVEFSSPSSM MNGSIHMKTL DCKPHRKFKK KNMKCRMRSM HLVSNNLFRA SLSLRKKKKH RRSKRHTSDI KNLTQEHLLE AGCLSVGQGP
801: STSDKTQTTS VGPTNRWGKR VKHGTKKGDK RTAGKDVKTS NSECVMDTMD VEFRDRIGEE GAMLATDKEP QKSSISVAKQ RDAQRSDSLN DSKRDQMQNG
901: LMSMLTRGLD ETIVARWDEI EWPSNRVMES RSVEGVTIGY VPDEWDEEYD RGKRKKVRSS NGSFGGPNPF QEIATKKAHF KKAKKDRSSS GNQPFRI
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.