Factsheet for TraesCS7D01G149800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G147900.1	Wheat	nucleus	94.56	96.2
TraesCS7B01G051400.2	Wheat	nucleus	95.3	95.1
HORVU7Hr1G030300.1	Barley	nucleus	91.57	92.26
Os06t0184300-01	Rice	mitochondrion	65.96	66.88
EER89337	Sorghum	nucleus	62.01	63.36
Zm00001d045104_P005	Maize	nucleus	58.91	61.13
KRH72298	Soybean	cytosol, plastid	27.75	51.18
GSMUA_Achr3P04660_001	Banana	nucleus	31.06	48.5
TraesCS6D01G339500.1	Wheat	nucleus	47.28	42.88
CDY02782	Canola	nucleus	34.26	40.07
CDX88651	Canola	nucleus, plastid	34.69	39.44
CDY11838	Canola	nucleus, plastid	34.37	39.32
Bra006790.1-P	Field mustard	nucleus, plastid	34.69	39.11
CDY57464	Canola	nucleus	35.33	39.03
CDY32735	Canola	nucleus	33.19	38.83
CDY55010	Canola	nucleus	34.15	37.65
AT5G57990.1	Thale cress	nucleus	34.47	37.6
VIT_19s0014g00210.t01	Wine grape	nucleus	35.86	37.58
Bra020400.1-P	Field mustard	nucleus	33.4	37.58
KRH03060	Soybean	nucleus	35.75	37.1
Solyc07g005530.2.1	Tomato	nucleus	36.5	37.05
GSMUA_Achr4P01920_001	Banana	nucleus	37.89	36.75
PGSC0003DMT400028924	Potato	nucleus	35.97	36.39
VIT_00s0174g00260.t01	Wine grape	nucleus	38.21	35.91
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	31.38	34.63
Bra002683.1-P	Field mustard	nucleus	35.11	33.5
TraesCS4D01G304300.1	Wheat	cytosol	10.99	28.14
TraesCS7D01G125700.1	Wheat	nucleus	10.89	27.87
TraesCS2D01G517600.1	Wheat	mitochondrion	10.46	26.49
TraesCS6D01G250100.1	Wheat	nucleus	18.25	23.14
TraesCS6D01G187000.1	Wheat	nucleus, plastid	9.82	22.55
TraesCS1D01G331300.1	Wheat	plastid	15.47	22.45
TraesCS1D01G196500.1	Wheat	cytosol	13.23	21.99
TraesCS1D01G196600.1	Wheat	nucleus	15.15	16.3
TraesCS5D01G252600.2	Wheat	endoplasmic reticulum, vacuole	15.37	15.91
TraesCS6D01G179700.1	Wheat	plasma membrane	15.47	14.84
TraesCS7D01G280800.4	Wheat	plastid	15.58	14.72
TraesCS7D01G485600.1	Wheat	golgi, plasma membrane	16.54	14.55
TraesCS2D01G129600.2	Wheat	cytosol	10.89	13.23

Protein Annotations

MapMan:19.2.3.1.1.9	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	PFAM:PF00443	ScanProsite:PS00972	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR44033	PANTHER:PTHR44033:SF1	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
EnsemblPlantsGene:TraesCS7D01G149800	EnsemblPlants:TraesCS7D01G149800.1	InterPro:USP_CS	InterPro:USP_dom	TIGR:cd02661	SEG:seg

Description

No Description!

Coordinates

chr7D:-:98637892..98644179

Molecular Weight (calculated)

101377.0 Da

IEP (calculated)

10.146

GRAVY (calculated)

-0.619

Length

937 amino acids

Sequence
(BLAST)

001: MAEVSAAAAP VPEGVLHRRI EFHAARRPHA AAAVGGGGFQ METLNPDAAG GAATAAAGAA RGEAEARRPE KAEALGLDPE LTVARIYLGR IGAGLQNLGN
101: TCYLNSVLQC LTYTEPFAAY LQSGRHKSSC RTAGFCALCA LQNHVKTALQ STGKIVTPSQ IVKNLRCISR SFRNSRQEDA HELMVNLLES MHKCCLPSGV
201: PSESASAYEK SLVHRIFGGR LRSQVKCTRC SHCSNTFDPF LDLSLDIGKA TTLVRALQNF TEDELLDGGQ KQYQCERCRQ KVVAKKRFTI DRAPNVLTVH
301: LKRFSPFRPR EKIDKKVDFQ PVLDLKPFMS DSKGADYKYS LYGVLVHAGW STQSGHYYCF VRTSSGMWHN LDDNQVRQVR EADVLKQKAY MLFYVRDRIG
401: NTLGRKDNST PNLPVNKMIP GKISSINGVI GSGVMEAKSS GLTSSYANKK LQSTSNAHSS VSSMTLVDHC STNAGKAETA AALQNSVLPS AQKALGPQND
501: GATLSTKSKQ VASSSHKEAS SSGQLASSNQ TMAKMSLQEP KPGGALAKLG NNTSIASSMV SGPAGLSETD KQTSCSQTCS KPSSNLVGTI TGFTAQTFQT
601: KDAVLSNGVI PSTSGGDPVS SEKMKDLTGS LKQDDHVVKA LTMSKKEKTI LPGLEQVDVG KQISSQVSTK VVPGDSCNGR MTKRVDSKSK KLVRYPVMKL
701: WLRPRQLSLK QQKKRKKTKK RVKGTPSVDC SGDNSSEQQT STSATVPPKT AASTSRKRKH AHASASSEND TQAFKDRQQA VGASNAGAGD DNMTRNRESG
801: TSARAEPPKL GSISSTDKAH SRNNVDAKRG AASQQVVIRT EDLRAEVTVP CWDDVAVPNS ETREYKSSGK KSIGYVLDEW DEEYDRGKAK KVRKAKEDED
901: DDGMNPFQAE ANYVSARKTK QNSYKSKPWD KPARPSR

Best Arabidopsis Sequence Match ( AT5G57990.1 )
(BLAST)

001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI

Arabidopsis Description

UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.