Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89337 | Sorghum | nucleus | 85.27 | 83.97 |
| TraesCS7A01G147900.1 | Wheat | nucleus | 61.02 | 59.83 |
| TraesCS7B01G051400.2 | Wheat | nucleus | 62.02 | 59.64 |
| HORVU7Hr1G030300.1 | Barley | nucleus | 61.24 | 59.46 |
| Os06t0184300-01 | Rice | mitochondrion | 60.35 | 58.98 |
| TraesCS7D01G149800.1 | Wheat | nucleus | 61.13 | 58.91 |
| KRH72298 | Soybean | cytosol, plastid | 27.69 | 49.21 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 32.0 | 48.17 |
| CDX88651 | Canola | nucleus, plastid | 33.67 | 36.89 |
| CDY11838 | Canola | nucleus, plastid | 33.22 | 36.63 |
| Bra006790.1-P | Field mustard | nucleus, plastid | 33.67 | 36.58 |
| KRH03060 | Soybean | nucleus | 36.54 | 36.54 |
| CDY02782 | Canola | nucleus | 32.34 | 36.45 |
| PGSC0003DMT400028924 | Potato | nucleus | 37.21 | 36.29 |
| CDY57464 | Canola | nucleus | 34.0 | 36.2 |
| Solyc07g005530.2.1 | Tomato | nucleus | 36.77 | 35.97 |
| CDY55010 | Canola | nucleus | 33.78 | 35.88 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 38.21 | 35.71 |
| CDY32735 | Canola | nucleus | 31.56 | 35.58 |
| VIT_19s0014g00210.t01 | Wine grape | nucleus | 35.22 | 35.57 |
| AT5G57990.1 | Thale cress | nucleus | 33.33 | 35.04 |
| VIT_00s0174g00260.t01 | Wine grape | nucleus | 38.65 | 35.01 |
| Bra020400.1-P | Field mustard | nucleus | 31.78 | 34.45 |
| Zm00001d000312_P002 | Maize | plastid | 10.08 | 32.38 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 29.79 | 31.68 |
| Bra002683.1-P | Field mustard | nucleus | 34.33 | 31.57 |
| Zm00001d028005_P001 | Maize | nucleus | 11.41 | 28.14 |
| Zm00001d003476_P002 | Maize | cytosol | 11.07 | 27.17 |
| Zm00001d025570_P003 | Maize | nucleus | 11.07 | 27.17 |
| Zm00001d051513_P001 | Maize | nucleus | 16.61 | 25.38 |
| Zm00001d016918_P001 | Maize | plastid | 11.18 | 24.22 |
| Zm00001d050489_P001 | Maize | nucleus | 11.96 | 23.63 |
| Zm00001d047023_P001 | Maize | nucleus | 14.62 | 21.26 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 17.28 | 21.08 |
| Zm00001d010710_P002 | Maize | plastid | 15.28 | 20.2 |
| Zm00001d002086_P001 | Maize | plastid | 12.18 | 19.54 |
| Zm00001d022414_P001 | Maize | cytosol | 11.41 | 18.66 |
| Zm00001d020769_P005 | Maize | nucleus | 16.39 | 17.29 |
| Zm00001d036707_P006 | Maize | plasma membrane | 17.28 | 16.28 |
| Zm00001d053450_P066 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 15.73 | 14.64 |
| Zm00001d016165_P039 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 15.95 | 14.31 |
| Zm00001d000313_P001 | Maize | nucleus | 4.76 | 11.62 |
| Zm00001d007096_P007 | Maize | mitochondrion | 11.52 | 8.79 |
Protein Annotations
| EntrezGene:103637980 | MapMan:19.2.3.1.1.9 | Gene3D:3.90.70.10 | ProteinID:AQL01552.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:K7VA26 |
| PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0002220AA8 | InterPro:USP_CS | InterPro:USP_dom | EnsemblPlantsGene:Zm00001d045104 |
| EnsemblPlants:Zm00001d045104_P005 | EnsemblPlants:Zm00001d045104_T005 | SEG:seg | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase
Coordinates
chr9:+:12687973..12699001
Molecular Weight (calculated)
98241.4 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.538
Length
903 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVSMAAAP EGVLHRRIEF HLARRPHGSV AVGGGGFRME TLNPDAAGKV GPGEAVGSSE GDARRPEKGD SGGIDPELSV ARIYLGRIGA GLENLGNTCY
101: LNSVLQCLTY TEPFAAYLQS GKHTSSCRTS GFCALCALQI HVKTALESTG KIVTPFRIVK NLRCISRTFR NSRQEDAHEL MVNLLESMHK CCLPSGVSTE
201: SQSAYDKSLV HKIFGGRLRS QVKCTRCLHC SNKFDPFLDL SLEIAKATTL VRALENFTED ELLDEGQKEY ECERCRQKVV AKKRLTIDKA PNVLTIHLKR
301: FSPFNPREKI DKKVDFQSIL DLKPFVSDSK GTDFKYSLYG VLVHTGWSTQ SGHYYCYVRT SSGMWHNLDD KEVRQVREAD VLKQKAYMLF YVRNSIGKSV
401: VCKDNNAANL LKKKTSEKIS SLNGIAQTNV RAQNLNGVSP FGDKTHGTII GYSTISSKTK TIHCSKNEVK AEDAPASQNN ALPSTQAPIA RNDVGILPTK
501: PMQFAVKNEE KTSSHQPAPF TNTCGEQTVV GRPLQEMEPK AGAGENTSVV SAVANDAATL SKADKLTSQP QTAPSSKPTA NVKDTATEFA TLSLSKKDSV
601: VSNGAVLSIG CLTSGEKAMN LSESVDQANE ITKALPTSQN NTAPVIAQAD CGVEISSGVI MHVAVSASCN GTTEKKVNSK SKKFVRYPVV NMWLGSRHLK
701: PGKKANRKRS KMIRRVVACK DAANLSCLSE QLTSTSSTAC SETVECTSSH QKRSHASARS KDDAQSSQNK QKVDGARVGA GTSAPSCSAG VPKSDPNPST
801: DAKVVATQPA SIRATDLMEA TVPRWDDVDM PNIKVAEPQS KRKSGGYILD EWDEEYDRGK TKKVRRSKQD FGGPNPFQEE ADYVSQRRTK QKSYRGKSWN
901: KRA
101: LNSVLQCLTY TEPFAAYLQS GKHTSSCRTS GFCALCALQI HVKTALESTG KIVTPFRIVK NLRCISRTFR NSRQEDAHEL MVNLLESMHK CCLPSGVSTE
201: SQSAYDKSLV HKIFGGRLRS QVKCTRCLHC SNKFDPFLDL SLEIAKATTL VRALENFTED ELLDEGQKEY ECERCRQKVV AKKRLTIDKA PNVLTIHLKR
301: FSPFNPREKI DKKVDFQSIL DLKPFVSDSK GTDFKYSLYG VLVHTGWSTQ SGHYYCYVRT SSGMWHNLDD KEVRQVREAD VLKQKAYMLF YVRNSIGKSV
401: VCKDNNAANL LKKKTSEKIS SLNGIAQTNV RAQNLNGVSP FGDKTHGTII GYSTISSKTK TIHCSKNEVK AEDAPASQNN ALPSTQAPIA RNDVGILPTK
501: PMQFAVKNEE KTSSHQPAPF TNTCGEQTVV GRPLQEMEPK AGAGENTSVV SAVANDAATL SKADKLTSQP QTAPSSKPTA NVKDTATEFA TLSLSKKDSV
601: VSNGAVLSIG CLTSGEKAMN LSESVDQANE ITKALPTSQN NTAPVIAQAD CGVEISSGVI MHVAVSASCN GTTEKKVNSK SKKFVRYPVV NMWLGSRHLK
701: PGKKANRKRS KMIRRVVACK DAANLSCLSE QLTSTSSTAC SETVECTSSH QKRSHASARS KDDAQSSQNK QKVDGARVGA GTSAPSCSAG VPKSDPNPST
801: DAKVVATQPA SIRATDLMEA TVPRWDDVDM PNIKVAEPQS KRKSGGYILD EWDEEYDRGK TKKVRRSKQD FGGPNPFQEE ADYVSQRRTK QKSYRGKSWN
901: KRA
001: MEVATSSTEI TIQTDRDPSS NNNGSCAVAS STASAVFRKI EFHPARKPFN GFSNGRSDFK IETLNPCSSN QRLLSAPSAK KPDSSDLLEH GFEPDLTFSI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
101: TFRKIGAGLQ NLGNTCFLNS VLQCLTYTEP LAATLQTAAH QKYCHVAGFC ALCAIQKHVR TARQANGRIL APKDLVSNLR CISRNFRNCR QEDAHEYMIN
201: LLECMHKCSL PSGVPSESSD AYRRSLVHKI FGGSLRSQVK CEQCSHCSNK FDPFLDLSLD ISKADSLQRA LSRFTAVELL DNGAKVYQCE RCKQKVKAKK
301: QLTVSKAPYV LTVHLKRFEA HRSEKIDRKV DFTSAIDMKP FVSGPHEGNL KYTLYGVLVH YGRSSHSGHY ACFVRTSSGM WYSLDDNRVV QVSEKTVFNQ
401: KAYMLFYVRD RQNAVPKNSV PVVKKESFAT NRASLIVASN IKDQVNGSTV IKECGFGALV ANGLAPLKSC GPSTPAVLTQ KDLNAKETQN NAISNVEAKE
501: ILETENGSAP VKTCDLAAPT VLVQKDLNTK EIFQKEVPLP QANGEGSLVK EDSKAACLIL PEKVSPHLDG SANAQTLVKL PTLGPKAENS VEEKNSLNNL
601: NEPANSLKVI NVSVGNPPVE KAVLIDQTMG HHLEESATSI ESLKLTSERE TLTTPKKTRK PKTKTLKVEF KFFKLALGLR KKKVQRRERL STTVAGEIIS
701: EELLSKKRVK YQDTSLIAPS KMISSSDGAV TSDQQQPVGS SDLSEASQNA KRKRESVLLQ KEAVNILTRG VPETVVAKWD EEISASQKRG SKSEGASSIG
801: YVADEWDEEY DRGKKKKIRI KEESYRGPNP FQMLASKRQK ETKKKWTQSI TDAKTAYRI
Arabidopsis Description
UBP23Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.