Factsheet for Zm00001d053450_P066

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	92.78	93.17
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	91.75	88.47
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	79.18	78.77
TraesCS6D01G179700.1	Wheat	plasma membrane	78.04	77.48
TraesCS6A01G192600.1	Wheat	plasma membrane	77.73	76.94
TraesCS6B01G231700.4	Wheat	plasma membrane	77.84	76.73
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	44.33	51.31
GSMUA_Achr2P20080_001	Banana	plasma membrane	48.14	49.63
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	46.8	49.03
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.52	44.81
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.41	44.75
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.41	44.7
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	44.85	43.94
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	44.74	43.88
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	40.31	43.83
VIT_19s0140g00200.t01	Wine grape	plasma membrane	44.64	43.43
CDX96790	Canola	nucleus	37.22	43.23
CDX83925	Canola	nucleus	37.53	42.98
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	42.78	42.96
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	39.79	41.59
Zm00001d000312_P002	Maize	plastid	9.07	31.32
Zm00001d050489_P001	Maize	nucleus	14.74	31.29
Zm00001d028005_P001	Maize	nucleus	10.41	27.6
Zm00001d003476_P002	Maize	cytosol	10.1	26.63
Zm00001d025570_P003	Maize	nucleus	10.1	26.63
Zm00001d020769_P005	Maize	nucleus	22.89	25.93
Zm00001d036707_P006	Maize	plasma membrane	24.74	25.05
Zm00001d016918_P001	Maize	plastid	9.79	22.78
Zm00001d051513_P001	Maize	nucleus	12.58	20.64
Zm00001d002086_P001	Maize	plastid	11.86	20.43
Zm00001d022414_P001	Maize	cytosol	11.13	19.57
Zm00001d010710_P002	Maize	plastid	12.99	18.45
Zm00001d017686_P002	Maize	mitochondrion, nucleus	13.2	17.3
Zm00001d045104_P005	Maize	nucleus	14.64	15.73
Zm00001d047023_P001	Maize	nucleus	9.9	15.46
Zm00001d007096_P007	Maize	mitochondrion	11.03	9.04
Zm00001d000313_P001	Maize	nucleus	3.3	8.65

Protein Annotations

EntrezGene:103654750	MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	UniProt:A0A1D6QPL2	ProteinID:AQK59477.1
ProteinID:AQK59483.1	ProteinID:AQK59484.1	ProteinID:AQK59488.1	ProteinID:AQK59489.1	ProteinID:AQK59500.1	ProteinID:AQK59501.1
ProteinID:AQK59509.1	ProteinID:AQK59511.1	ProteinID:AQK59524.1	ProteinID:AQK59525.1	ProteinID:AQK59526.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	InterPro:IPR002893
InterPro:IPR028889	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50865
PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232	SUPFAM:SSF54001	TMHMM:TMhelix
UniParc:UPI0004DEC6B9	InterPro:USP_CS	InterPro:USP_dom	EnsemblPlantsGene:Zm00001d053450	EnsemblPlants:Zm00001d053450_P066	EnsemblPlants:Zm00001d053450_T066
InterPro:Znf_MYND	SEG:seg	:	:	:	:

Description

Putative ubiquitin carboxyl-terminal hydrolase superfamily protein

Coordinates

chr4:+:232067347..232077638

Molecular Weight (calculated)

107435.0 Da

IEP (calculated)

7.109

GRAVY (calculated)

-0.504

Length

970 amino acids

Sequence
(BLAST)

001: MLQPREADLP ALFLVFIVLP VVAYFLLGRW HDAASKKARV SVLAQRAAEE AYREETMACP DIILPGSSLR TMPYFRPMPA LRQEYHECAT CHAPAKTRCS
101: RCKAVRYCSG KCQIVHWRQG HKETCQKWLG SGSSSFGGSS TEATEQMPFL TNLNSPLPGG DIHLRDLNFD TLSEPSFPTT DGYNLDTDPF LADRSNMNKS
201: NQGIHMSENG AVGVSFEKNN YNADDEIHSP ENLSRNKVSN NYFGSDAISG NGDAIYPAKS NAQQPSSCAP DMRKQPKASI TVYQPDIGVY LTSDMVSSCE
301: GSYASASEPL QRSLSSGRTI GKANAVNKRP PYPSSKVVSA QKPQDRVSTS YQNDGHEKNP CNKNDQRSTP KCESSQSTSS NLQKFGASKV EVLKKPSKFL
401: KTSLVGLIND NKRNKVLFPY EDLVKFFQYE ARGISPRGLF NCGNSCYANA VLQCLMCTKP LMIYLLLRLH SKDCSSKKWC LMCELEQYAS TLRESGGPLS
501: PSRILSNLRN IGCRLGGGTQ EDAHEFLRHL VMSMQAACLD GLGGEKHVEP SLQETTLIQQ MFGGRLKSKV KCLRCYHESE RYENIMDLTL EIHGWVESLQ
601: DALTQFTAPE DLDGDNMYKC GSCAAYVKAR KQLSVHEVPN ILTVVLKRFQ SGKYGKINKC VTFPDMLDMV PFVTGSGDNP PLYFLYAVVV HVDTENASFS
701: GHYISYVKDM QGTWLRIDDS EVQVVSVNQV MSEGAYMLFY MRSFPRPPRI YIEKGPTVPS AKRHTSKYSK GSKHEREQTE LLLSANDPAY GVYDFRPDGE
801: GYTQDQQAEL RSRDFHRADD AFADSVSADF SEATSSEWSL FTSSDESSFT TESTRDSFSV VDYGDNAGLD PISSIFGPSY APEHHPGPPG SFAACTRLSP
901: SNPQTRYFSE STGFVSDYSS SGIVHRGRDP GRAYTCSAEP LASAAAAHQH QRYALSGRDG LVQTSGFCQM

Best Arabidopsis Sequence Match ( AT1G17110.1 )
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW

Arabidopsis Description

UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.