CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	93.17	92.78
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	95.65	91.85
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	81.26	80.51
TraesCS6D01G179700.1	Wheat	plasma membrane	80.43	79.53
TraesCS6A01G192600.1	Wheat	plasma membrane	80.12	78.98
TraesCS6B01G231700.4	Wheat	plasma membrane	80.23	78.76
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	44.51	51.31
GSMUA_Achr2P20080_001	Banana	plasma membrane	48.76	50.05
GSMUA_Achr3P17560_001	Banana	endoplasmic reticulum, golgi	47.31	49.35
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.89	45.04
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	40.79	44.98
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.79	44.93
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	45.76	44.69
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	45.55	44.44
VIT_19s0140g00200.t01	Wine grape	plasma membrane	45.76	44.33
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	40.79	44.17
CDX96790	Canola	nucleus	37.58	43.47
CDX83925	Canola	nucleus	38.1	43.45
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	43.27	43.27
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	40.06	41.7
OQU80649	Sorghum	nucleus	24.02	28.78
EER92723	Sorghum	nucleus	10.56	27.87
EES12269	Sorghum	cytosol	10.25	26.9
OQU89635	Sorghum	vacuole	24.12	25.55
KXG20513	Sorghum	golgi, plasma membrane	24.84	24.59
EES07024	Sorghum	mitochondrion	9.73	22.43
EES12962	Sorghum	plastid	12.11	20.71
KXG22316	Sorghum	plastid	12.73	18.17
OQU85579	Sorghum	nucleus	12.94	16.78
EER89337	Sorghum	nucleus	14.7	15.49
OQU90420	Sorghum	mitochondrion	11.18	14.65
OQU81355	Sorghum	cytosol, nucleus, plastid	1.14	14.1
OQU92076	Sorghum	nucleus	11.08	12.36

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	EntrezGene:8085583	UniProt:C5XZ01	ProteinID:EES06573.1
GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004843	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006511
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008283	GO:GO:0009056	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010154	GO:GO:0016020	GO:GO:0016021	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	GO:GO:0048364	GO:GO:0048366
GO:GO:0048367	InterPro:IPR002893	InterPro:IPR028889	EnsemblPlants:OQU84698	ProteinID:OQU84698	ProteinID:OQU84698.1
PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972	PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45492
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	EnsemblPlantsGene:SORBI_3004G107200	SUPFAM:SSF144232	SUPFAM:SSF54001	unigene:Sbi.21174
TMHMM:TMhelix	UniParc:UPI0001A85E22	InterPro:USP_CS	InterPro:USP_dom	RefSeq:XP_002453597.1	InterPro:Znf_MYND
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:10244892..10256539

Molecular Weight (calculated)

107220.0 Da

IEP (calculated)

7.261

GRAVY (calculated)

-0.528

Length

966 amino acids

Sequence
(BLAST)

001: MLQPREADVP ALFLVFIVLP VVAYFLLGRW HDAASKKARV SVLAHRAAEE AYREETMACP DIIPPGPSLR TMPYFRPAPS LRQEYHECAT CHAPAKTRCS
101: RCKSVRYCSG KCQIVHWRQG HKETCQKWLG SGSSSFGGSS TEATEQMPFL TNLNSPLPGG DIHLRDMNFD TLSEPSFPTT DGYNLDTDPF PADRSNMDRS
201: NQGIHMSENG AVGVSFEKNN YNAADEIHSP EILSGNKVSN NYFGSDAISG NGDATYPAKS NAHQPSSCAP DMRKQSKASI TVYQPDTGVY LTSDMVSSCE
301: GSYVSASEPL QRSLSSGRTI GKANVVNKRP PHPSSKVVSA QKSQDRVSTS YQNDGHEKNP YNKNEQRSTP TCESSQPTSS NLQKFGASKV EVLKKPSKFL
401: KTSLVGLIND NKRNKVLFPY EDLVKFFQYE ARGISPRGLF NCGNSCYANA VLQCLMCTKP LMIYLLLRLH SKDCSSKNWC LMCELEQYAS TLRESGGPLS
501: PSRILSNLRN IGCRLGGGTQ EDAHEFLRHL VMSMQAACLD GLGGEKHVEP SLQETTLIQQ MFGGRLKSKV KCLRCYHESE RYENIMDLTL EIHGWVESLQ
601: DALTQFTAPE DLDGDNMYKC GRCSAYVKAR KQLSVHEVPN ILTLVLKRFQ SGKYGKINKC VTFPDMLDMV PFVTGSGDNP PLYFLYAVVV HVDTENASFS
701: GHYISYVKDM QGTWLRIDDS EVQVVSVNQV MSEGAYMLFY LRSFPRPPRI YIEKGLPVTS VKRHTSKSSK GSKHERKQTS ANDQAYGVYD FRPDGEGYMQ
801: DHHAELRSRD FHHADDAFAD SVSTDFSEAT SSEWSLFTSS DESSFTTEST RDSFSVVDYG DNAGLDPISS IFGPSYAPEH PPGNFVSCTR FSPSNPQTRY
901: FSESTGFVSD SSMPAHPSGI VHRGRYPDRA CASSAEPLAS AHQRSGYGRY PLSRDGFVQT SGFCQM

Best Arabidopsis Sequence Match ( AT1G17110.3 )
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW

Arabidopsis Description

UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.