Factsheet for GSMUA_Achr3P17560_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P03560_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	62.42	68.97
GSMUA_Achr2P20080_001	Banana	plasma membrane	65.23	64.19
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	51.51	48.92
TraesCS6D01G179700.1	Wheat	plasma membrane	51.4	48.72
TraesCS6B01G231700.4	Wheat	plasma membrane	51.4	48.37
TraesCS6A01G192600.1	Wheat	plasma membrane	51.19	48.37
OQU84698	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	49.35	47.31
Zm00001d053450_P066	Maize	endoplasmic reticulum, plasma membrane, vacuole	49.03	46.8
Zm00001d016165_P039	Maize	endoplasmic reticulum, plasma membrane, vacuole	49.35	45.43
VIT_19s0140g00200.t01	Wine grape	plasma membrane	48.38	44.93
CDY65125	Canola	endoplasmic reticulum, plasma membrane, vacuole	41.79	44.13
Bra026003.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	41.68	44.01
CDY48465	Canola	endoplasmic reticulum, plasma membrane, vacuole	41.47	43.84
GSMUA_Achr7P05090_001	Banana	vacuole	22.03	43.68
Bra016618.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	41.25	42.83
CDX96790	Canola	nucleus	38.55	42.75
CDX83925	Canola	nucleus	38.88	42.5
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	44.28	42.44
KRH13569	Soybean	endoplasmic reticulum, plasma membrane	44.38	41.56
KRH21804	Soybean	endoplasmic reticulum, plasma membrane	44.38	41.52
AT1G17110.2	Thale cress	endoplasmic reticulum, plasma membrane	41.58	41.49
GSMUA_Achr7P19020_001	Banana	endoplasmic reticulum, golgi	12.85	30.83
GSMUA_Achr10P...	Banana	nucleus	13.5	30.79
GSMUA_Achr10P...	Banana	golgi	13.82	28.44
GSMUA_Achr10P...	Banana	cytosol	10.58	28.41
GSMUA_Achr7P19010_001	Banana	nucleus	14.04	28.26
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	10.69	28.12
GSMUA_Achr5P22990_001	Banana	vacuole	27.11	27.92
GSMUA_Achr7P19170_001	Banana	cytosol	4.0	27.61
GSMUA_AchrUn_...	Banana	golgi, vacuole	28.62	26.16
GSMUA_Achr8P14390_001	Banana	cytosol	10.15	25.68
GSMUA_Achr10P...	Banana	nucleus	10.37	25.67
GSMUA_Achr1P11380_001	Banana	cytosol	9.94	24.66
GSMUA_Achr7P19160_001	Banana	mitochondrion	8.1	24.59
GSMUA_Achr7P05330_001	Banana	cytosol	8.1	23.51
GSMUA_Achr3P04660_001	Banana	nucleus	14.36	22.17
GSMUA_Achr8P09770_001	Banana	cytosol	9.94	21.5
GSMUA_Achr7P17050_001	Banana	plastid	11.56	20.5
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	12.53	19.8
GSMUA_Achr9P10330_001	Banana	mitochondrion	13.28	19.74
GSMUA_Achr1P10260_001	Banana	endoplasmic reticulum, plasma membrane	22.14	18.13
GSMUA_Achr4P01920_001	Banana	nucleus	15.01	14.39
GSMUA_Achr6P01970_001	Banana	nucleus, plastid	11.99	13.07

Protein Annotations

MapMan:19.2.3.1.1.7	Gene3D:3.30.60.180	Gene3D:3.90.70.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr3G17560_001	EnsemblPlants:GSMUA_Achr3P17560_001	EnsemblPlants:GSMUA_Achr3T17560_001
InterPro:IPR002893	InterPro:IPR028889	UniProt:M0SFH2	PFAM:PF00443	PFAM:PF01753	ScanProsite:PS00972
PFscan:PS50235	PFscan:PS50865	PANTHER:PTHR45492	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF144232
SUPFAM:SSF54001	TMHMM:TMhelix	UniParc:UPI0002948E73	InterPro:USP_CS	InterPro:USP_dom	InterPro:Znf_MYND
SEG:seg	:	:	:	:	:

Description

Putative Ubiquitin carboxyl-terminal hydrolase 15 [Source:GMGC_GENE;Acc:GSMUA_Achr3G17560_001]

Coordinates

chr3:+:19095766..19110589

Molecular Weight (calculated)

104650.0 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.613

Length

926 amino acids

Sequence
(BLAST)

001: MLQPREADIP ALFIFLVLIP LFTYILLGRW NEAAKKKARI SILAQLAAEE AFQVEAMASA SVLQVLPSSR TGFHECTRCF APATTRCSRC KSVRYCSGKC
101: QIIHWRQGHK HECQQWHDSS LDVLAGLPLK DTVRHKSILN NSKSSYLCNG IEEPLHYNIQ NDMDDPSFIS TDTSEDSETG RKSSRMGVVN KSKKDKSYGD
201: DYTACAFDQD HDHDASNRNS TVSPCQIHMN QETNISSNAR SPMVQHNKSA AETRKGLEQS GSTATSSRLH SDKHVISECQ NGANISPEKA DFSESGFSSS
301: NEKFHVSYPA EHYSAKESIM YRKPPYTLGH TASSSQKLAE NMSRGYHSQS LGKICDKENG SGIRQKNISS NIHIRGLSGN ASIEGIMAGS KKNPKALKRN
401: LLLLLNDNKK NKVCQMLFPY EDLVKFFQCE EWRISPRGLL NCGNSCYANA VLQCLTGTKP LMVYLLQRSH SRTCCVKEWC LMCELEQHVS MLKEGGGPLS
501: ASKILLNMRN IGCRMGGGNQ EDAHEFLRLL VMSMQSCIFG GRLKSKVKCQ RCHLESERYE SIMDLTLEIH GRVESLEDAL TQFTAPEDLD GENMYRCGRC
601: LAYVEARKQL SLHEVPNILT IVLKRFQTGK YGKINKCVTF PEMLDMIPFV TGTADNPPLY LLYAVVVHVD TLNASFSGHY ISYVKDLEGT WFRIDDSEVQ
701: AVPPNQVMSE GAYMLFYARS FPRPPQAHTE KKLSHPPTFA KRSVVKSQKS SKHGQQRQDG SLHASENLVN PRNHMGKEHD TSSMEFSDAT SSDWHLFTSS
801: DDSSFTTEST RDSFSTADYG DNTSIDTISS IFNPFYAPSY VHGNAVSCTK FPPCRPQTRF FMDSTSGSLV ANSAFRRYSG FLFHCGGKKR RRERERERER
901: EREREREERE REREREREVQ RWESPL

Best Arabidopsis Sequence Match ( AT1G17110.3 )
(BLAST)

001: MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE
101: TVAEQRSDSV TATCGVTVVA PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV SFEKDSVLYD HGMDSTMYSN
201: NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS
301: SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM
401: GLRNSTKHDD RYKNLKMLFP YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW CLMCELEQHV MMLRESGGPL
501: SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL
601: QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF
701: SGHYISYVKD LRGNWYRIDD SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP RADHKNTESS SSEWSLFTSS
801: DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS
901: MYVNYETNPE FNNGQDQDRT YSYW

Arabidopsis Description

UBP15Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.