Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- mitochondrion 4
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 84.26 | 74.49 |
| KRH59329 | Soybean | nucleus | 86.23 | 71.27 |
| VIT_07s0141g00230.t01 | Wine grape | nucleus | 86.23 | 71.27 |
| KRH43175 | Soybean | nucleus | 85.9 | 71.0 |
| KRG97572 | Soybean | nucleus | 85.57 | 70.73 |
| GSMUA_Achr8P14390_001 | Banana | cytosol | 84.59 | 70.49 |
| KRH31299 | Soybean | nucleus | 84.92 | 70.19 |
| CDX76934 | Canola | nucleus | 81.31 | 70.06 |
| CDY13770 | Canola | nucleus | 81.31 | 69.66 |
| Bra038533.1-P | Field mustard | nucleus | 80.98 | 69.58 |
| Zm00001d003476_P002 | Maize | cytosol | 83.28 | 69.02 |
| PGSC0003DMT400032703 | Potato | nucleus | 82.62 | 68.85 |
| CDY68864 | Canola | nucleus | 83.93 | 68.82 |
| Bra010647.1-P | Field mustard | nucleus | 83.93 | 68.82 |
| AT2G22310.1 | Thale cress | nucleus | 82.3 | 68.77 |
| EES12269 | Sorghum | cytosol | 82.95 | 68.75 |
| Os04t0452400-01 | Rice | nucleus | 82.62 | 68.66 |
| AT4G39910.1 | Thale cress | nucleus | 83.28 | 68.46 |
| CDX69375 | Canola | nucleus | 83.28 | 68.46 |
| Zm00001d025570_P003 | Maize | nucleus | 82.3 | 68.21 |
| Solyc01g105240.2.1 | Tomato | nucleus | 80.98 | 67.49 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 81.64 | 67.3 |
| Os03t0190800-01 | Rice | cytosol | 80.66 | 67.21 |
| TraesCS4D01G304300.1 | Wheat | cytosol | 80.0 | 66.67 |
| Zm00001d028005_P001 | Maize | nucleus | 80.0 | 66.67 |
| HORVU4Hr1G078590.1 | Barley | cytosol | 79.67 | 66.39 |
| TraesCS7D01G125700.1 | Wheat | nucleus | 79.67 | 66.39 |
| EER92723 | Sorghum | nucleus | 79.67 | 66.39 |
| TraesCS4B01G306100.1 | Wheat | cytosol | 79.67 | 66.39 |
| TraesCS4A01G406600.1 | Wheat | cytosol | 79.34 | 66.12 |
| GSMUA_Achr10P... | Banana | nucleus | 80.33 | 65.51 |
| CDY63898 | Canola | nucleus | 82.95 | 63.57 |
| HORVU2Hr1G079230.7 | Barley | mitochondrion | 82.3 | 60.63 |
| Bra011823.1-P | Field mustard | nucleus | 82.3 | 56.92 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 71.15 | 53.19 |
| Zm00001d016918_P001 | Maize | plastid | 72.46 | 53.0 |
| TraesCS6D01G187000.1 | Wheat | nucleus, plastid | 70.82 | 52.94 |
| CDY68683 | Canola | endoplasmic reticulum, vacuole | 83.93 | 52.57 |
| EES07024 | Sorghum | mitochondrion | 72.13 | 52.51 |
| HORVU6Hr1G050090.1 | Barley | nucleus, plastid | 70.16 | 52.45 |
| TraesCS6B01G223900.1 | Wheat | plastid | 69.51 | 50.6 |
| Os02t0573400-01 | Rice | nucleus | 67.87 | 49.88 |
| GSMUA_Achr7P05330_001 | Banana | cytosol | 22.62 | 21.63 |
| GSMUA_Achr1P11380_001 | Banana | cytosol | 26.23 | 21.45 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 23.61 | 20.45 |
| GSMUA_Achr7P19170_001 | Banana | cytosol | 8.2 | 18.66 |
| GSMUA_Achr8P09770_001 | Banana | cytosol | 25.25 | 17.99 |
| GSMUA_Achr7P05090_001 | Banana | vacuole | 25.25 | 16.49 |
| GSMUA_Achr10P... | Banana | nucleus | 18.69 | 14.04 |
| GSMUA_Achr7P19010_001 | Banana | nucleus | 20.98 | 13.91 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 25.57 | 13.31 |
| GSMUA_Achr7P17050_001 | Banana | plastid | 22.3 | 13.03 |
| GSMUA_Achr3P04660_001 | Banana | nucleus | 25.25 | 12.83 |
| GSMUA_Achr9P10330_001 | Banana | mitochondrion | 24.92 | 12.2 |
| GSMUA_Achr3P03560_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 25.9 | 9.43 |
| GSMUA_Achr6P01970_001 | Banana | nucleus, plastid | 24.92 | 8.95 |
| GSMUA_Achr5P22990_001 | Banana | vacuole | 26.23 | 8.9 |
| GSMUA_Achr2P20080_001 | Banana | plasma membrane | 25.57 | 8.29 |
| GSMUA_Achr3P17560_001 | Banana | endoplasmic reticulum, golgi | 24.59 | 8.1 |
| GSMUA_Achr4P01920_001 | Banana | nucleus | 25.57 | 8.07 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 24.59 | 7.4 |
| GSMUA_Achr1P10260_001 | Banana | endoplasmic reticulum, plasma membrane | 25.9 | 6.98 |
| GSMUA_Achr10P... | Banana | golgi | 4.92 | 3.33 |
| GSMUA_Achr7P19020_001 | Banana | endoplasmic reticulum, golgi | 3.28 | 2.59 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0036459 | EnsemblPlantsGene:GSMUA_Achr7G19160_001 | EnsemblPlants:GSMUA_Achr7P19160_001 | EnsemblPlants:GSMUA_Achr7T19160_001 | InterPro:IPR028889 |
| UniProt:M0TIV3 | PFAM:PF00443 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF2 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI000296D4C8 | InterPro:USP_CS | InterPro:USP_dom |
Description
Ubiquitin carboxyl-terminal hydrolase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr7G19160_001]
Coordinates
chr7:-:21946809..21948927
Molecular Weight (calculated)
35148.9 Da
IEP (calculated)
6.893
GRAVY (calculated)
-0.426
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCFIRNLCL SWYFVQISSQ KKKTGVIAPK RFVQRVKKQN EYFRSYMHQD AHEFLNFLLN ELADILEKES DAAKDSIETS SPSEKLANGP NHSLPNGVPK
101: EPLLTWVHKN FQGILTNETR CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL NAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYV
201: EQLGRYKKLS YRVVFPMELK LNNTVEDIDS EYSLFAVVVH VGSGPNHGHY VSLVKSHNHW LLFDDENVEM IDESMVQTFF GSSQEYSGNT DNGYILFYES
301: LGGKS
101: EPLLTWVHKN FQGILTNETR CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL NAEDKFFCDK CCSLQEAQKR MKIKKPPHIL VIHLKRFKYV
201: EQLGRYKKLS YRVVFPMELK LNNTVEDIDS EYSLFAVVVH VGSGPNHGHY VSLVKSHNHW LLFDDENVEM IDESMVQTFF GSSQEYSGNT DNGYILFYES
301: LGGKS
001: MNLSLLQALY FCAPFREQLL EHYANNKADA EENLLTCLAD LFSQISSQKK KTGVIAPKRF VQRLKKQNEL FRSYMHQDAH EFLNYLLNEL VEILEKETQA
101: TKADNETSSS PEKIANVLKA PLANGVHKEP IVTWVHKIFQ GILTNETRCL RCETVTARDE TFLDLSLDIE QNSSITSCLK NFSSTETLHA EDKFFCDKCC
201: SLQEAQKRMK IKKPPHILVI HLKRFKYMEQ LGRYKKLSYR VVFPLELKLS NTVDEYVDIE YSLFAVVVHV GSGPNHGHYV SLVKSHNHWL FFDDESVEII
301: EESAVQTFFG SSQEYSSNTD HGYILLYESL GTR
101: TKADNETSSS PEKIANVLKA PLANGVHKEP IVTWVHKIFQ GILTNETRCL RCETVTARDE TFLDLSLDIE QNSSITSCLK NFSSTETLHA EDKFFCDKCC
201: SLQEAQKRMK IKKPPHILVI HLKRFKYMEQ LGRYKKLSYR VVFPLELKLS NTVDEYVDIE YSLFAVVVHV GSGPNHGHYV SLVKSHNHWL FFDDESVEII
301: EESAVQTFFG SSQEYSSNTD HGYILLYESL GTR
Arabidopsis Description
UBP4UBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W1M0]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.