Factsheet for Os02t0573400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	63.61	76.52
TraesCS6A01G203500.1	Wheat	nucleus, plastid	73.98	75.25
TraesCS6D01G187000.1	Wheat	nucleus, plastid	73.73	75.0
HORVU6Hr1G050090.1	Barley	nucleus, plastid	73.01	74.26
Os04t0452400-01	Rice	nucleus	65.3	73.84
Zm00001d016918_P001	Maize	plastid	73.25	72.9
KRG97572	Soybean	nucleus	64.58	72.63
GSMUA_Achr8P14390_001	Banana	cytosol	63.86	72.4
EES07024	Sorghum	mitochondrion	73.01	72.31
KRH31299	Soybean	nucleus	63.86	71.82
KRH59329	Soybean	nucleus	63.61	71.54
VIT_07s0141g00230.t01	Wine grape	nucleus	63.37	71.27
KRH43175	Soybean	nucleus	63.37	71.27
PGSC0003DMT400032703	Potato	nucleus	62.65	71.04
TraesCS6B01G223900.1	Wheat	plastid	71.33	70.64
Solyc04g056290.2.1	Tomato	nucleus	61.93	69.65
Os03t0190800-01	Rice	cytosol	60.72	68.85
GSMUA_Achr10P...	Banana	nucleus	61.93	68.72
GSMUA_Achr7P19160_001	Banana	mitochondrion	49.88	67.87
VIT_09s0070g00500.t01	Wine grape	golgi, mitochondrion, nucleus, peroxisome	56.14	65.08
Os04t0647300-01	Rice	nucleus	26.02	18.27
Os07t0661300-01	Rice	cytosol, plasma membrane	21.2	18.0
Os05t0510300-01	Rice	plastid	21.69	13.98
Os09t0464400-00	Rice	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	24.34	10.88
Os08t0478500-01	Rice	plastid	25.3	10.74
Os02t0244300-01	Rice	endoplasmic reticulum, plasma membrane	24.58	10.46
Os06t0184300-01	Rice	mitochondrion	22.65	10.17
Os06t0654000-01	Rice	cytosol, nucleus	23.13	10.17
Os02t0795000-01	Rice	nucleus	23.13	8.1

Protein Annotations

MapMan:19.2.3.1.1.2	Gene3D:3.90.70.10	EntrezGene:4329740	ProteinID:BAD17530.1	ProteinID:BAF09116.1	ProteinID:BAS79361.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	EnsemblPlantsGene:Os02g0573400	EnsemblPlants:Os02t0573400-01	PFAM:PF00443
ScanProsite:PS00972	ScanProsite:PS00973	PFscan:PS50235	PANTHER:PTHR43942	PANTHER:PTHR43942:SF3	InterPro:Papain_like_cys_pep_sf
InterPro:Peptidase_C19_UCH	UniProt:Q6YXC1	SUPFAM:SSF54001	UniParc:UPI000035AF2D	InterPro:USP_CS	InterPro:USP_dom
RefSeq:XP_015625403.1	SEG:seg	:	:	:	:

Description

Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os02t0573400-01)

Coordinates

chr2:-:21986709..21991419

Molecular Weight (calculated)

46535.9 Da

IEP (calculated)

6.559

GRAVY (calculated)

-0.372

Length

415 amino acids

Sequence
(BLAST)

001: MARTARLLAA EDPPPPPAAA AERPRPAAAG SGLRSLSSAA SGLWDRLSVL GAGVSKLEKA LGDHFPEGAR YFGLENFGNT CYCNSVLQAL YHCIPFREQL
101: LEYYATYKNT EDSEDNLLTC LADLFSQITL AKKRTGVLAP KRFVQRVRKQ NELFRSYMHQ DAHEFWNFLV NDIIDILEED CRTANSSPET TPEEVSNGAA
201: NALANGARER PLVTLVHRTF QGILTNETKC LMCDTITAKD ETFFDLSIDV EQNSSLTSCL KSFFSTEILN GEDKFFCDKC SSLQEAHKRM KIKKAPHVLV
301: IHLKRFKYVE QLSRHKKLSY RVVYPLELKL GSMSEDADCE YSLFAVVVHV GSSPNHGHYV SQIKSHGNWL SFDDDTVQIS EESTLQTFYG SSREHCGGNT
401: DHGYILFYER LGGKS

Best Arabidopsis Sequence Match ( AT4G39910.1 )
(BLAST)

001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K

Arabidopsis Description

UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.