Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g105240.2.1 | Tomato | nucleus | 84.82 | 85.52 |
| EES12269 | Sorghum | cytosol | 84.55 | 84.78 |
| Zm00001d003476_P002 | Maize | cytosol | 84.55 | 84.78 |
| Zm00001d025570_P003 | Maize | nucleus | 84.01 | 84.24 |
| Os04t0452400-01 | Rice | nucleus | 83.47 | 83.92 |
| TraesCS2A01G340100.1 | Wheat | cytosol | 84.01 | 83.78 |
| HORVU2Hr1G079230.7 | Barley | mitochondrion | 84.28 | 75.12 |
| TraesCS6A01G203500.1 | Wheat | nucleus, plastid | 73.17 | 66.18 |
| Zm00001d016918_P001 | Maize | plastid | 74.53 | 65.95 |
| TraesCS6D01G187000.1 | Wheat | nucleus, plastid | 72.9 | 65.93 |
| EES07024 | Sorghum | mitochondrion | 74.8 | 65.87 |
| HORVU6Hr1G050090.1 | Barley | nucleus, plastid | 72.36 | 65.44 |
| TraesCS6B01G223900.1 | Wheat | plastid | 72.09 | 63.48 |
| Os02t0573400-01 | Rice | nucleus | 69.65 | 61.93 |
| Solyc08g048410.1.1 | Tomato | cytosol | 12.2 | 26.95 |
| Solyc07g007640.1.1 | Tomato | cytosol | 14.91 | 23.21 |
| Solyc09g015580.1.1 | Tomato | vacuole | 17.89 | 21.22 |
| Solyc09g015610.1.1 | Tomato | cytosol | 7.05 | 20.63 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 11.92 | 20.37 |
| Solyc09g015600.1.1 | Tomato | extracellular | 17.07 | 20.19 |
| Solyc09g017980.1.1 | Tomato | extracellular | 10.57 | 18.84 |
| Solyc10g047480.1.1 | Tomato | nucleus | 23.85 | 18.33 |
| Solyc11g065210.1.1 | Tomato | cytosol | 26.02 | 17.98 |
| Solyc08g005080.1.1 | Tomato | cytosol | 23.04 | 17.53 |
| Solyc01g068240.2.1 | Tomato | cytosol | 24.93 | 17.26 |
| Solyc09g017990.1.1 | Tomato | plastid | 21.68 | 16.77 |
| Solyc08g068810.2.1 | Tomato | cytosol | 24.93 | 16.76 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 10.03 | 15.81 |
| Solyc02g005600.1.1 | Tomato | vacuole | 20.6 | 15.57 |
| Solyc08g021830.1.1 | Tomato | cytosol | 14.36 | 15.14 |
| Solyc08g023360.1.1 | Tomato | extracellular | 10.3 | 14.96 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 27.37 | 14.72 |
| Solyc12g096430.1.1 | Tomato | nucleus, plastid | 24.39 | 14.47 |
| Solyc08g076910.2.1 | Tomato | nucleus | 26.02 | 13.45 |
| Solyc08g069050.2.1 | Tomato | extracellular | 25.75 | 12.23 |
| Solyc07g061780.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 28.18 | 10.77 |
| Solyc07g005530.2.1 | Tomato | nucleus | 26.83 | 10.73 |
| Solyc04g076210.2.1 | Tomato | nucleus | 26.29 | 8.83 |
Protein Annotations
| MapMan:19.2.3.1.1.2 | Gene3D:3.90.70.10 | MEROPS:C19.008 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016579 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 | UniProt:K4BSS7 | PFAM:PF00443 |
| ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR43942 | PANTHER:PTHR43942:SF2 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | EnsemblPlantsGene:Solyc04g056290.2 | EnsemblPlants:Solyc04g056290.2.1 | UniParc:UPI0002765C5C | InterPro:USP_CS |
| InterPro:USP_dom | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:53978616..53991518
Molecular Weight (calculated)
42126.6 Da
IEP (calculated)
5.940
GRAVY (calculated)
-0.491
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAGSKLEK ALGDQFPEGE RYFGLENFGN TCYCNSVLQA LYFCVPFREQ LLDYYSNNKS LADADENLLT CLADLFMQIS SQKKKTGVIA PKRFVQRLKK
101: QNEIFRSYMH QDAHEFLNYL LNELVDILEK EASPTKSDQE TSSPTEKNAN GPTSVHDNGD KKEPLVTWVH KNFQGILTNE TKCLRCETVT ARDETFLDLS
201: LDIEQNSSIT SCLKNFSSTE TLNAEDKFFC DKCCSLQEAQ KRMKIKKPPH ILVIHLKRFK YIEQLGRYKK LSYRVVFPLE LKLSNTVEDA DAEYSLFAVV
301: VHVGSGPNHG HYVSLVKSHN HWLFFDDENV EMIDESAVQT FFGSAQEYSS NTDHGYILFY ERVPNGSTS
101: QNEIFRSYMH QDAHEFLNYL LNELVDILEK EASPTKSDQE TSSPTEKNAN GPTSVHDNGD KKEPLVTWVH KNFQGILTNE TKCLRCETVT ARDETFLDLS
201: LDIEQNSSIT SCLKNFSSTE TLNAEDKFFC DKCCSLQEAQ KRMKIKKPPH ILVIHLKRFK YIEQLGRYKK LSYRVVFPLE LKLSNTVEDA DAEYSLFAVV
301: VHVGSGPNHG HYVSLVKSHN HWLFFDDENV EMIDESAVQT FFGSAQEYSS NTDHGYILFY ERVPNGSTS
001: MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
101: QNELFRSYMH QDAHEFLNYL LNEVVDILEK EAKATKTEHE TSSSSSPEKI ANGLKVPQAN GVVHKEPIVT WVHNIFQGIL TNETRCLRCE TVTARDETFL
201: DLSLDIEQNS SITSCLKNFS STETLHAEDK FFCDKCCSLQ EAQKRMKIKK PPHILVIHLK RFKYIEQLGR YKKLSYRVVF PLELKLSNTV EPYADVEYSL
301: FAVVVHVGSG PNHGHYVSLV KSHNHWLFFD DENVEMIEES AVQTFFGSSQ EYSSNTDHGY ILFYESLGPT K
Arabidopsis Description
UBP3Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.