Factsheet for Solyc09g015580.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g015600.1.1	Tomato	extracellular	82.32	82.05
Solyc09g015610.1.1	Tomato	cytosol	25.4	62.7
Solyc09g017990.1.1	Tomato	plastid	91.0	59.33
Solyc08g048410.1.1	Tomato	cytosol	30.23	56.29
Solyc08g048310.1.1	Tomato	extracellular, vacuole	37.94	54.63
Solyc09g017980.1.1	Tomato	extracellular	34.08	51.21
Solyc08g021790.1.1	Tomato	extracellular, vacuole	37.3	49.57
Solyc08g023360.1.1	Tomato	extracellular	38.26	46.85
Solyc02g005600.1.1	Tomato	vacuole	66.88	42.62
Solyc08g005080.1.1	Tomato	cytosol	63.02	40.41
Solyc08g021830.1.1	Tomato	cytosol	43.73	38.86
PGSC0003DMT400093591	Potato	cytosol	29.26	36.26
Solyc10g047480.1.1	Tomato	nucleus	55.63	36.04
GSMUA_Achr4P19070_001	Banana	cytosol, golgi, mitochondrion, plastid	29.26	25.85
Solyc08g076910.2.1	Tomato	nucleus	49.52	21.57
VIT_02s0012g01340.t01	Wine grape	nucleus	36.33	21.52
CDX87681	Canola	nucleus	37.62	18.57
Solyc07g007640.1.1	Tomato	cytosol	14.15	18.57
Bra021031.1-P	Field mustard	nucleus	38.26	18.54
CDX76553	Canola	cytosol	38.26	18.54
GSMUA_Achr5P13990_001	Banana	endoplasmic reticulum	34.73	18.43
Solyc01g105240.2.1	Tomato	nucleus	21.22	18.03
CDY37145	Canola	cytosol	38.59	18.02
KRH39541	Soybean	nucleus	42.77	18.0
Bra022060.1-P	Field mustard	nucleus	38.26	17.89
Solyc04g056290.2.1	Tomato	nucleus	21.22	17.89
Zm00001d051513_P001	Maize	nucleus	33.76	17.77
KRH74417	Soybean	nucleus	41.16	17.7
CDY58499	Canola	endoplasmic reticulum	39.55	17.06
Bra025000.1-P	Field mustard	endoplasmic reticulum	39.87	17.01
AT4G17895.1	Thale cress	nucleus	37.62	16.83
CDX77686	Canola	endoplasmic reticulum	39.87	16.42
AT5G46740.1	Thale cress	nucleus, plastid	38.26	16.26
TraesCS6A01G264800.1	Wheat	nucleus	34.08	14.44
OQU85579	Sorghum	nucleus	34.41	14.36
TraesCS6B01G291800.1	Wheat	nucleus	34.08	14.34
TraesCS6D01G250100.1	Wheat	nucleus	34.08	14.34
HORVU6Hr1G067180.4	Barley	nucleus	34.08	14.34
Zm00001d017686_P002	Maize	mitochondrion, nucleus	32.48	13.65
Solyc08g068810.2.1	Tomato	cytosol	21.86	12.39
Solyc07g056520.2.1	Tomato	cytosol, golgi, nucleus, plastid	27.01	12.24
Solyc12g096430.1.1	Tomato	nucleus, plastid	24.12	12.06
Solyc01g068240.2.1	Tomato	cytosol	19.29	11.26
Solyc11g065210.1.1	Tomato	cytosol	18.97	11.05
Solyc07g005530.2.1	Tomato	nucleus	30.23	10.18
Solyc08g069050.2.1	Tomato	extracellular	24.44	9.78
Solyc07g061780.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	22.19	7.14
Solyc04g076210.2.1	Tomato	nucleus	23.47	6.64

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579	GO:GO:0016787
GO:GO:0019538	GO:GO:0036459	InterPro:IPR028889	UniProt:K4CS29	PFAM:PF00443	ScanProsite:PS00973
PFscan:PS50235	PANTHER:PTHR44033	PANTHER:PTHR44033:SF1	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH	SUPFAM:SSF54001
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g015580.1	EnsemblPlants:Solyc09g015580.1.1	UniParc:UPI000276BF10	InterPro:USP_CS	InterPro:USP_dom

Description

No Description!

Coordinates

chr9:+:10058976..10060982

Molecular Weight (calculated)

35902.8 Da

IEP (calculated)

5.111

GRAVY (calculated)

-0.290

Length

311 amino acids

Sequence
(BLAST)

001: MRKLGNTCFL NVIVQSFMHT VVLLQLLRSI DHVSPCLNFS SHFNVNKQED AHEFLQCFLN KLEICCNYLD IEENIVQEAF GGSLVNKMES FTKIEKIEFS
101: CERCKTQGPF EKQLLVDHSP NVVVLHLKRF KYNGLVVQKV EKHVLFSLEL DMLLYSNAIN NEEIKYDLYA VIVHSGPSIS SGHYYNFIRC APNECSKFDD
201: EKVDYVQEDL VLAEQAYILF YTKRGTPWFS DYIKSYRPFL CLVNPTTTSD ANEPTLIPEV NNVEDNDSHD QVYCEDQLQV VEIKQDEKLK DALNCGSHGT
301: SVNEIKRKLK D

Best Arabidopsis Sequence Match ( AT4G17895.1 )
(BLAST)

001: MLMAKPDVPS SILPRSSSIL PNSIETLDEN ESIEAQVNNV QSLALSSPNR DRSDDDDNNN NHDSVSIPPP IYDGYSSSSS DESQSVPSPP INLDHDDDEC
101: QIPIRNTSQA LDDIDDDIWG DDDLPETRRP WTPNVSPGFG SDDDDDNDDD NSKNEPRKSL FYGFRQEPEP VTGVGAGLWN LGNSCFLNSV FQCFTHTVPL
201: IESLLSFRYE VPCHCGNEFF CVIRAIRYHI EAALRPERCP IAPYFFFDNL NYFSPDFQRY QQEDAHEFLQ AFLEKLEICG SDRTSFRGDI TSQDVFSGRL
301: ISGLRCCNCD YVSETYEKSV GLSLEIEDVD TLGSALESFT RVEKLDEQLT CDNCNEKVSK EKQLLLDKLP LVATFHLKRF KNNGLYMEKI YKHVKIPLEI
401: DLQPYMRNIQ ENEVSTKYHL YALVEHFGYS VAYGHYSSYV RSAPKIWHHF DDSKVTRIDE DMVLSQDSYI LFYAREGTRW FSSVYEEMQP LVEASLLNSS
501: PKSVLDSSTN GECLSEISYE NGDKASKPCD SAGVCNQHVK TKEDFVSLSN DDVFLSAESS SGEESPMGEL LDPLDPDDSY SPCTEKESDS CLAIERATIR
601: DDFFPLLLDQ NQESSTSSPK LQERTFEMQL LQMEETTKSQ EPWKQPLSSI SNIADSMEAE FVYGDLMKKP SPRARELLDQ AISTNGSPPK KLKTT

Arabidopsis Description

UBP20Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.