Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051513_P001 | Maize | nucleus | 67.3 | 84.26 |
| OQU85579 | Sorghum | nucleus | 81.49 | 80.94 |
| TraesCS6A01G264800.1 | Wheat | nucleus | 58.78 | 59.26 |
| TraesCS6D01G250100.1 | Wheat | nucleus | 58.92 | 59.0 |
| TraesCS6B01G291800.1 | Wheat | nucleus | 58.11 | 58.19 |
| HORVU6Hr1G067180.4 | Barley | nucleus | 57.03 | 57.1 |
| GSMUA_Achr4P19070_001 | Banana | cytosol, golgi, mitochondrion, plastid | 21.76 | 45.74 |
| GSMUA_Achr5P13990_001 | Banana | endoplasmic reticulum | 28.92 | 36.52 |
| Solyc08g048410.1.1 | Tomato | cytosol | 7.7 | 34.13 |
| Solyc09g015600.1.1 | Tomato | extracellular | 14.19 | 33.65 |
| PGSC0003DMT400093121 | Potato | cytosol | 13.11 | 33.56 |
| VIT_02s0012g01340.t01 | Wine grape | nucleus | 23.24 | 32.76 |
| Solyc09g015580.1.1 | Tomato | vacuole | 13.65 | 32.48 |
| Solyc08g005080.1.1 | Tomato | cytosol | 20.54 | 31.34 |
| Zm00001d000312_P002 | Maize | plastid | 10.95 | 28.83 |
| PGSC0003DMT400046008 | Potato | cytosol | 20.54 | 28.63 |
| Solyc10g047480.1.1 | Tomato | nucleus | 18.51 | 28.54 |
| Solyc09g017980.1.1 | Tomato | extracellular | 7.97 | 28.5 |
| Solyc08g048310.1.1 | Tomato | extracellular, vacuole | 8.24 | 28.24 |
| PGSC0003DMT400045160 | Potato | nucleus | 27.03 | 28.09 |
| Solyc09g017990.1.1 | Tomato | plastid | 17.97 | 27.88 |
| Solyc08g021790.1.1 | Tomato | extracellular, vacuole | 8.78 | 27.78 |
| Solyc08g021830.1.1 | Tomato | cytosol | 13.11 | 27.71 |
| Solyc08g076910.2.1 | Tomato | nucleus | 26.62 | 27.59 |
| PGSC0003DMT400093591 | Potato | cytosol | 9.32 | 27.49 |
| Zm00001d047023_P001 | Maize | nucleus | 22.97 | 27.38 |
| CDX87681 | Canola | nucleus | 23.11 | 27.14 |
| KRH74417 | Soybean | nucleus | 26.08 | 26.69 |
| PGSC0003DMT400089939 | Potato | cytosol | 13.38 | 26.47 |
| KRH39541 | Soybean | nucleus | 26.35 | 26.39 |
| Zm00001d028005_P001 | Maize | nucleus | 12.97 | 26.23 |
| Solyc09g015610.1.1 | Tomato | cytosol | 4.46 | 26.19 |
| Solyc02g005600.1.1 | Tomato | vacuole | 17.16 | 26.02 |
| CDX76553 | Canola | cytosol | 22.3 | 25.7 |
| Bra021031.1-P | Field mustard | nucleus | 22.3 | 25.7 |
| CDY37145 | Canola | cytosol | 23.11 | 25.68 |
| Bra022060.1-P | Field mustard | nucleus | 22.84 | 25.41 |
| Solyc08g023360.1.1 | Tomato | extracellular | 8.65 | 25.2 |
| Zm00001d003476_P002 | Maize | cytosol | 12.43 | 25.0 |
| Zm00001d025570_P003 | Maize | nucleus | 12.43 | 25.0 |
| AT4G17895.1 | Thale cress | nucleus | 23.24 | 24.75 |
| AT5G46740.1 | Thale cress | nucleus, plastid | 24.46 | 24.73 |
| CDY58499 | Canola | endoplasmic reticulum | 23.78 | 24.41 |
| Bra025000.1-P | Field mustard | endoplasmic reticulum | 23.78 | 24.14 |
| Zm00001d016918_P001 | Maize | plastid | 13.24 | 23.5 |
| CDX77686 | Canola | endoplasmic reticulum | 23.92 | 23.44 |
| PGSC0003DMT400088084 | Potato | cytosol | 9.19 | 20.24 |
| Zm00001d002086_P001 | Maize | plastid | 14.59 | 19.18 |
| Zm00001d010710_P002 | Maize | plastid | 16.08 | 17.42 |
| Zm00001d045104_P005 | Maize | nucleus | 21.08 | 17.28 |
| Zm00001d050489_P001 | Maize | nucleus | 10.41 | 16.85 |
| Zm00001d022414_P001 | Maize | cytosol | 12.43 | 16.67 |
| Zm00001d020769_P005 | Maize | nucleus | 16.62 | 14.37 |
| Zm00001d053450_P066 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 17.3 | 13.2 |
| Zm00001d036707_P006 | Maize | plasma membrane | 17.03 | 13.15 |
| Zm00001d016165_P039 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 17.3 | 12.72 |
| Zm00001d000313_P001 | Maize | nucleus | 5.14 | 10.27 |
| Zm00001d007096_P007 | Maize | mitochondrion | 12.3 | 7.69 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | UniProt:A0A1D6HGK6 | ProteinID:AQK73737.1 | ProteinID:AQK73738.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0036459 | InterPro:IPR028889 |
| PFAM:PF00443 | ScanProsite:PS00972 | ScanProsite:PS00973 | PFscan:PS50235 | PANTHER:PTHR44033 | PANTHER:PTHR44033:SF1 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0008429615 | InterPro:USP_CS | InterPro:USP_dom |
| EnsemblPlantsGene:Zm00001d017686 | EnsemblPlants:Zm00001d017686_P002 | EnsemblPlants:Zm00001d017686_T002 | SEG:seg | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase 20
Coordinates
chr5:+:204298151..204308212
Molecular Weight (calculated)
82117.8 Da
IEP (calculated)
5.102
GRAVY (calculated)
-0.592
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPRPHQPAG HLLRGRETLT GARIPLYSMA EQDGDAGQMP PDSVPVVGVG DQNTNQHQPF FSMCQPLRTV SYSNSWDGTC VAAANENDHT GISGTLDRED
101: DSCSRHSINK EVSLVQGVMK MEQSMDGVDV PHGGASEQPE PLGTQQPDSF DEVDLWDVQD NKQALPLNSN QCNFNIGETC DAEDMHFPLS ASYRRQPKCV
201: GAGLSNMGNT CFLNATLQCI THTVPLFLKL CSNDHFTPCS YNEDGFCSFC ALKEHVDESI RRSGSVIAPT KFRDSLRKLS LDFTPGQQED AHEFLRCLLD
301: NLHECTLDPK SKSKGSSFEE ESIVKEIFGG QLKSHLSCCE CGHSSETFEP FLDLSLEIDQ VDHLVDALQS FTKVEQVGDS ENKLTCESCN ARVCKNKQLT
401: LYRAPDVIAF HLKRFTTLDN SVKKIDKYVA YPLEVDLKPF HSNPETVGEL KYDLYGVVEH SGLPNYGHYV CTIRSSPSTW YLMNDSNVDS ITDSSALNQE
501: AYILFYVRQG KFPWFSSLLE GKVVLQAENT CGTSPVSVLE NIDVNCSTSS GGGSSSSSGD KLEKNEASQL EETKKDETSQ YKTSFLPDEP SKSSFGASNS
601: NNAMDEDNPP RVSFQNSVAS CSRSVETTNL EKPSTPRCSQ RLASHDEFSV FEFEDFDEEK ETLLPKLKFP SKVKKANSAS RAMKGRCIDQ NAVRLMRSMT
701: STRRKGLIDC IAQQTAKHES NRCPASDPLD KKKRKLVLQY
101: DSCSRHSINK EVSLVQGVMK MEQSMDGVDV PHGGASEQPE PLGTQQPDSF DEVDLWDVQD NKQALPLNSN QCNFNIGETC DAEDMHFPLS ASYRRQPKCV
201: GAGLSNMGNT CFLNATLQCI THTVPLFLKL CSNDHFTPCS YNEDGFCSFC ALKEHVDESI RRSGSVIAPT KFRDSLRKLS LDFTPGQQED AHEFLRCLLD
301: NLHECTLDPK SKSKGSSFEE ESIVKEIFGG QLKSHLSCCE CGHSSETFEP FLDLSLEIDQ VDHLVDALQS FTKVEQVGDS ENKLTCESCN ARVCKNKQLT
401: LYRAPDVIAF HLKRFTTLDN SVKKIDKYVA YPLEVDLKPF HSNPETVGEL KYDLYGVVEH SGLPNYGHYV CTIRSSPSTW YLMNDSNVDS ITDSSALNQE
501: AYILFYVRQG KFPWFSSLLE GKVVLQAENT CGTSPVSVLE NIDVNCSTSS GGGSSSSSGD KLEKNEASQL EETKKDETSQ YKTSFLPDEP SKSSFGASNS
601: NNAMDEDNPP RVSFQNSVAS CSRSVETTNL EKPSTPRCSQ RLASHDEFSV FEFEDFDEEK ETLLPKLKFP SKVKKANSAS RAMKGRCIDQ NAVRLMRSMT
701: STRRKGLIDC IAQQTAKHES NRCPASDPLD KKKRKLVLQY
001: MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
101: QISPVSNNNH LRITNTSDSY LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC FTHTVPLIDS LRSFMYGNPC
201: NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC
301: NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS
401: SNHDPEVSTR YHLYAFVEHI GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ LKTVFEATPL HFSPVSVLDN
501: SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE
601: PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR
701: AQTPRARKLA NALSDSPTKK KKSSNMRRSI KL
Arabidopsis Description
UBP21Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.