Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22316 | Sorghum | plastid | 91.1 | 37.81 |
| Zm00001d010710_P002 | Maize | plastid | 86.83 | 35.72 |
| TraesCS1D01G331300.1 | Wheat | plastid | 80.07 | 34.83 |
| TraesCS1A01G329200.2 | Wheat | plastid | 80.43 | 34.82 |
| TraesCS1B01G342600.2 | Wheat | plastid | 79.72 | 34.67 |
| Os05t0510300-01 | Rice | plastid | 79.36 | 34.63 |
| HORVU1Hr1G077630.2 | Barley | plastid | 79.72 | 34.51 |
| GSMUA_Achr9P10330_001 | Banana | mitochondrion | 62.99 | 28.41 |
| PGSC0003DMT400071055 | Potato | mitochondrion | 55.87 | 25.4 |
| VIT_19s0093g00560.t01 | Wine grape | mitochondrion | 52.67 | 23.31 |
| KRH43852 | Soybean | nucleus | 52.67 | 23.09 |
| Solyc07g056520.2.1 | Tomato | cytosol, golgi, nucleus, plastid | 55.16 | 22.59 |
| KRH13611 | Soybean | nucleus | 52.31 | 22.55 |
| AT3G14400.1 | Thale cress | mitochondrion | 52.67 | 22.39 |
| Bra027341.1-P | Field mustard | mitochondrion | 53.38 | 21.83 |
| CDX75770 | Canola | mitochondrion, nucleus | 51.25 | 21.69 |
| CDX98449 | Canola | mitochondrion | 53.38 | 21.31 |
| CDX97571 | Canola | mitochondrion | 53.38 | 21.19 |
| Zm00001d028005_P001 | Maize | nucleus | 24.56 | 18.85 |
| Zm00001d003476_P002 | Maize | cytosol | 24.56 | 18.75 |
| Zm00001d025570_P003 | Maize | nucleus | 24.56 | 18.75 |
| Zm00001d016918_P001 | Maize | plastid | 24.91 | 16.79 |
| Zm00001d051513_P001 | Maize | nucleus | 28.83 | 13.71 |
| Zm00001d002086_P001 | Maize | plastid | 26.69 | 13.32 |
| Zm00001d047023_P001 | Maize | nucleus | 28.47 | 12.88 |
| Zm00001d022414_P001 | Maize | cytosol | 22.42 | 11.41 |
| Zm00001d017686_P002 | Maize | mitochondrion, nucleus | 28.83 | 10.95 |
| Zm00001d045104_P005 | Maize | nucleus | 32.38 | 10.08 |
| Zm00001d050489_P001 | Maize | nucleus | 16.01 | 9.85 |
| Zm00001d020769_P005 | Maize | nucleus | 29.89 | 9.81 |
| Zm00001d053450_P066 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 31.32 | 9.07 |
| Zm00001d036707_P006 | Maize | plasma membrane | 29.54 | 8.66 |
| Zm00001d016165_P039 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 30.96 | 8.65 |
| Zm00001d007096_P007 | Maize | mitochondrion | 23.84 | 5.66 |
| Zm00001d000313_P001 | Maize | nucleus | 1.07 | 0.81 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | UniProt:A0A1X7YHX0 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0036459 | InterPro:IPR028889 | PFAM:PF00443 | PFscan:PS50235 | PANTHER:PTHR45511 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Peptidase_C19_UCH | SUPFAM:SSF54001 | UniParc:UPI0008433B9C | InterPro:USP_dom | EnsemblPlantsGene:Zm00001d000312 | EnsemblPlants:Zm00001d000312_P002 |
| EnsemblPlants:Zm00001d000312_T002 | SEG:seg | : | : | : | : |
Description
Ubiquitin carboxyl-terminal hydrolase 25
Coordinates
chrB73V4_ctg51:+:27816..30222
Molecular Weight (calculated)
30869.5 Da
IEP (calculated)
8.737
GRAVY (calculated)
-0.262
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTAESSSP PPQRRPRTGP PPGLKNLSNT CYLNCVLQCL ASTPPLATFC LASGHSDICK KVSPNRDKEC AFCVLERQIA RLLRADAGAL DSPAKVIRCM
101: PLFAEHFRWG RQEDAHEFLR YVVDACHTAG LRTRKLLLAK GANGNCGEDG RGQGACLVMR ETFGGALLSQ VKCLVCNRES NKTDEIMDIS LDLPGSSSVA
201: DALARFFKPE ILEGANKYSC ERCKTLTSAQ KQMFMLRAPK VLVIQLKRFE GINGGKINRN IEFKETLGIS DCMYNKSQVA H
101: PLFAEHFRWG RQEDAHEFLR YVVDACHTAG LRTRKLLLAK GANGNCGEDG RGQGACLVMR ETFGGALLSQ VKCLVCNRES NKTDEIMDIS LDLPGSSSVA
201: DALARFFKPE ILEGANKYSC ERCKTLTSAQ KQMFMLRAPK VLVIQLKRFE GINGGKINRN IEFKETLGIS DCMYNKSQVA H
001: MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH CDTYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S
Arabidopsis Description
UBP25Ubiquitin carboxyl-terminal hydrolase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.