Factsheet for HORVU1Hr1G077630.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G14400.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT3G14400.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT3G14400.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G331300.1	Wheat	plastid	95.38	95.82
TraesCS1B01G342600.2	Wheat	plastid	94.92	95.36
TraesCS1A01G329200.2	Wheat	plastid	94.61	94.61
Zm00001d000312_P002	Maize	plastid	34.51	79.72
Os05t0510300-01	Rice	plastid	73.5	74.07
KXG22316	Sorghum	plastid	67.18	64.4
Zm00001d010710_P002	Maize	plastid	65.18	61.93
GSMUA_Achr9P10330_001	Banana	mitochondrion	51.62	53.77
Zm00001d000313_P001	Maize	nucleus	30.2	52.97
VIT_19s0093g00560.t01	Wine grape	mitochondrion	41.91	42.83
KRH43852	Soybean	nucleus	40.06	40.56
KRH13611	Soybean	nucleus	40.68	40.49
PGSC0003DMT400071055	Potato	mitochondrion	37.9	39.81
Solyc07g056520.2.1	Tomato	cytosol, golgi, nucleus, plastid	41.29	39.07
AT3G14400.1	Thale cress	mitochondrion	37.44	36.76
CDX75770	Canola	mitochondrion, nucleus	36.67	35.84
Bra027341.1-P	Field mustard	mitochondrion	37.9	35.81
CDX98449	Canola	mitochondrion	37.75	34.8
CDX97571	Canola	mitochondrion	37.9	34.75
HORVU4Hr1G078590.1	Barley	cytosol	14.95	26.5
HORVU6Hr1G050090.1	Barley	nucleus, plastid	14.64	23.28
HORVU2Hr1G079230.7	Barley	mitochondrion	14.18	22.22
HORVU5Hr1G069620.20	Barley	cytosol, nucleus	19.72	17.37
HORVU2Hr1G114330.1	Barley	cytosol	14.95	17.32
HORVU6Hr1G067180.4	Barley	nucleus	18.8	16.51
HORVU7Hr1G030300.1	Barley	nucleus	22.96	16.02
HORVU7Hr1G064340.3	Barley	endoplasmic reticulum	19.57	12.79
HORVU2Hr1G022340.2	Barley	cytosol	13.25	11.33
HORVU7Hr1G111430.5	Barley	cytosol, nucleus	17.72	10.94

Protein Annotations

Gene3D:3.90.70.10	MapMan:35.1	UniProt:A0A287GCA8	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016579
GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	EnsemblPlantsGene:HORVU1Hr1G077630	EnsemblPlants:HORVU1Hr1G077630.2	InterPro:IPR028889
PFAM:PF00443	ScanProsite:PS00972	PFscan:PS50235	PANTHER:PTHR45511	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C19_UCH
SUPFAM:SSF54001	UniParc:UPI000B474480	InterPro:USP_CS	InterPro:USP_dom	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:518064149..518071401

Molecular Weight (calculated)

70674.1 Da

IEP (calculated)

8.596

GRAVY (calculated)

-0.424

Length

649 amino acids

Sequence
(BLAST)

001: MAPTAEPPSA APPRRPRSGP PPGLKNLGNT CYLNSVLQCL ASTPPLANFC LASRHSNLCK KAFPNRDKEC AFCVLERQIV RQLRAEAGAL DSPGKVIRSL
101: PLFAEHFRWG RQEDAHEFLR YVIDACHTAC LRIRKRLPVA TANGDCGPEE GRGQQGGCMV MRETFGGALL SQVKCLVCKG ESNKTDEIMD LSLDLLGTSS
201: VGDALTCFFR PEVLEGANKY SCERCKKLTS ARKQMFILQA PKVLVIQLKR FDGIHGGKIN RNIEFKEGLV LSDFMYDKNQ DPQPVYNLFG SIVHSGFSQD
301: SGHYYAYVKD ATGRWYCCND AHVSLSSSQD VLTEKVYILF YILSSKTQKN STNGYSSSAV KSSSTNGNGI SSAACSEPLK IPLVKQNGSC STKGIVPLPL
401: KNGKIAPGLQ FKPIHLKNTG TEKVASNGKP HPVLKKPEVN DATTLVVSNG CGPGKSAEPS KGYANGSISC DKLDADSQRM LEDTDGNGHP VHFVGLQETS
501: GAKATCAEKS PEQPSSVVSS TLDKNICSSE NPKSSVLHPE LSADSVKAVV ASAKDSARVK HHLDEGKFKE MLAESASSEL RSSSWAEDVC NFMRSAKRRC
601: IQNTGTSQDS EAIRKQLISD SGRVFRSKIP ELLREDLIQS LRSYFEDKF

Best Arabidopsis Sequence Match ( AT3G14400.1 )
(BLAST)

001: MGFKLQMSWM PSLLSQKRRN GPPLGLRNLG NTCYLNSVLQ CLTFTPPLAN FCLTHKHSSH CDTYVDGERK RDCPFCIVEK RIARSLSVDL TTDAPNKISS
101: CLKIFAEHFK LGRQEDAHEF LRYVIDACHN TSLRLKKLRY NGNEPFNGNS VVKEIFGGAL QSQVKCLSCG AESNKADEIM DISLEILQSS SVKESLQKFF
201: QSEILDGNNK YRCESCEKLV TARKQMSILQ APNILVIQLK RFGGIFGGKI DKAISFGEIL VLSNFMSKAS KDPQPEYKLF GIIVHSGFSP ESGHYYAYVK
301: DSLGRWYCCN DSFVSLSTLQ EVLSEKAYIL FFSRSNQRPA SAKTLVTSNG TTSHEVNGCE TSNPQKFIGP LNGFNMKPQA EQSFQKGNLA SSKPHKFIRP
401: KPRAEQAPLE DNLLSSKVEK APLRPHAKVS ISVNLGAKRV SPVNGRLSFH QDENIAPKAN KENSVSVLPT KVNSGTERKF GTENGGNGVK ENGSAPGSSN
501: HKVALHPHER SNGSSNGGDH HKDNLHPCGS NGSQNGTAHP ETERNGVSTT QSKGLCSSTK EDPCILLRKD ESSRNELEAI KESLKKDALS HLRSCGWYDK
601: VLISMHAKKR LRTEQSGGED GSDLKRRLIE DVKSSLKSQI PEELKADLVN RIWEISKKKY S

Arabidopsis Description

UBP25Ubiquitin carboxyl-terminal hydrolase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.